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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23217_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.26 TPM:4.82
ORF EntryO_BomoMSG11302_5prime_partial:A_BomoMSG_c23217_g1_i1
Sequence
(Nucleotide)
CTGCACGCGGGCGTGTCCGCCGGCGACCGGCGCGTGGTGCAGCAGCTGGTAGAGTGCGGC
GCCGCGCAGCTGTGCGTGGTCGCCGCCGAGCTGGCCTGGAGCTTCGCCGCGCACGTGCAC
ACCGTCATCGTGGCCGACACGTGCACGTACAACGGCAAGCTGCACTCGTACGAGCAGTAC
CCGATAACGACGGTGCTGCAGATGATCGGGCGCGCGTGCCGCCCGCTGGAGGACGACCAC
TCGGTGGCGGTGCTCATGTGCGCCGCGCACCACAAGACCTTCTTCACCAAGTTGCTCAAC
GACTGTCTGCCGCTGGAGAGTCACTTGGACCACAGACTCCACGATCACATGAACGCCGAG
ATAGTGACGAAGACCATAGAGAACAAGCAAGACGCCGTCGACTACTTGACCTGGACATTC
CTGTACCGGCGGCTCACGCAGAACCCCAACTACTACAACTTACAGGGGGTCACGCACAGG
CACCTGTCGGACCACCTCTCCGAGCTGGTGGAGACTACGCTGACGGATCTTGAGCAGTCC
AAGTGCATCGCGATAGAGGATGAAATGGATGTCCAGCCACTGAACTTGGGGATGATAGCC
TCATACTACTATATCAACTATACGACCATAGAACTGTTTAGTTTGTCTCTGACGAGCAAA
ACGAAGATCCGCGGCCTGCTCGAGATAATATCGTCGGCGGCCGAGTACTCGGACCTCTGC
ATCCGACACCGGGAGGAGAACATCATCAAATCTCTCGCCTCCAAGGTCCCGCACAAGCCG
ACGGCCCCGTCTGGCGGCGCCGTGCGGCACAACGACCCGCACGTGAAGGCGCACGTGCTG
CTCCAGGCGCACCTCTCCAGGATGCAACTACCCGCCGAGCTGCAGGCCGACACCGCGCTC
GTGCTCACCAAGG
(913 bp)

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