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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23210_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101736849_isoform_X1_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.09 TPM:1.61
ORF EntryO_BomoMSG11287_5prime_partial:A_BomoMSG_c23210_g1_i1
Sequence
(Nucleotide)
GGACGAGGCCGTAACTCACTACATAAATACACATCAAGCAAACGAGACTGTTCATGTAAC
TACAAATGGACTACCTCTCAGTGTCCAAGATGATGGCGGCGGACGTGTCACCGTCATGCA
CACGCAAAACTACTCAGCACCAATGTGCAGCAGACAAGTATCAGTCAACGATCAAGTAAC
AGAAGGTCAATGGGGCGAAGAACTCCTAGATCCTGACAGCAGGATTGCAGCTATTGTAGC
ACAACTAGCCCAGCAGTCGAGAACCTCACACCATCTACACCATAAGGTGCAGCAAGTCAG
GAACGATGTAGACACTTCGGTAATCCTAGATGGGTCGATGAGGCTTTACAACGGACAGAC
TTTGGAACAACAACAAGAACCTATTGTGGTACACGTACCACAACTACCGCCACTGCCCCC
ACTGCAAGAAATGAAGAGATGCCAGGAAACTGACTGGTTTCATAATAAAACAAAAAATGT
TGCAACACTAAAAGACAACAATCAAATCCTTACAGCAGCAGACAGTCCAGTTCTGGAACT
GGCTGGTGCCTCGCCGGTTCAGAATAAACACCAGAGCAAGAAAAGCTTGCCGCATAAGAA
GAGGATATCCAAAAAATTGAAGAAAAGTAATGGGAGTTGCACTCCTCAACAGGACATAGT
TGTGATTAGCTGTACAAACGAGGTGCCTCATGAAGAAATCCTACCTGATAACTTTGTGAC
TGGAGTGCAACACCAGGACCAGATGCCGGAAGATACTCATCATATCACACACGAGGTTCG
ACCGATTTTGTTATGTCAATTATGCGGAGAGTTCTACGGTGAAGAACAGTTGAAGTTCTT
CCAGCATCTTAAACAGCACTACGAACCTCACACTGCAATAATCATAGAAAATCCTGTACC
TGATTTAGGAATTGATAAGATGACAAACACGTGTATCGTTGACAACGTGGCAACCCTACC
AGACTCTATAGTAGAACTCTCCCTAGAAAACACAGTTCCTAAAACAATGTACCAAAATAT
AGATAAACAGATATTATATACGACAAACGATAAAACACTTAGTTACACGAACAATAAAGT
TCAATATTCGATGGCAAACATCGAGGGCCCGAAGGACGTGACCAGTACAGACGCCGACAA
GAGTGACCTGTACGACACTTTGGATAAATTAGAACTGTACAGTTGCGCGAAGTGCAGCAA
GTCGTTTCGGAAACAGAAGCAATGCGAAGCTCACATCAAGGAGGCTCATTCTAATGGAAA
GATAGACGACATGGGCGAGTTCAGCGAACCCGAGGACCTGATGGAGGGGATCCACGTGTC
GGTGGAGGAGGCGGCCGACCAGTACGAGCACACCCTGCTGCCGCACCTCACTGTGGACAA
CGGACACGTGCATCAAGAGCACGTCCGACATTGGTACTCCCGCGGCAACGCGTGCGACGA
GAGCGGGTGCTGCGGACTCTGCAGCACCGCCAGGGAGCACGACGCGCCGCCCCTCAAAGT
ACTCAAAGAGGAAGTGCTTCAGCGCATCTTAGAGACGGACGTCGCCAACGAACCGATGAT
CCCCGAGAGCATCATGCCGGAGCCGGAGTTGCCGCCGCCGCAGTCGCCCAAGGAGCCCCA
GAAGGAAGATAAGAAGAAGACCGGCAAGAAATACGGGTGTCCGCACTGCAGCAGGGTCTT
CTACCACAGGAGCAGCCTGTTCTACCACGTGCTGTCCCACGGCGGGAAGCAGCATGCGTG
CAAGGAGTGCGGGAAGGCCTTCTATACTTCTGGAGCCTTGAAGATCCACCGGCGCGTGCA
CAACGGGGACCGGCCCTACAAGTGCGACGTGTGCGGCCACGACTTCCGCCAGTGGACCGA
CCTCAAGTACCACAAGGTCATCCACACCAACCAGAAATGTTTTAAATGTGAGTTCTGCGG
CAAAGAGTTCGCCCGCAAGTACTCGCTCAACGTGCACCGGCGCATCCACACCGGCGAGCG
CAACTACAAGTGCGACTACTGCACCAAGTCCTTCCGCGCCTCCTCCTACCGCCTCAGCCA
CATGAAGACGCACACCGGCGACAAGCCCTACAAGTGCGAGCAGTGCGACAAGTCGTTCCG
CGTGGCCTTCGACCTGAAGCGCCACGTCCTCACGCACGAGAAGGCGAGGCAGCGTCTGGA
GCAGCAGAACAACAAGTCGAGACCCGAGAAGGAGCAGGCGAAGACCAAGCAGGACGACGC
AGACAAGAGGTCGATGGCCGCCAAGGGCGAGCGGAAGGCGCGGGGGGGTCGCAAGCTGCG
GAGGGGCGCCCCCAACGTGACCGTCGCCGACGAGCACTTGAAGGTGAAGCAGGAGTTCAG
GCCGGAGTACAGGCTGCGCGAGGAGTTCGGCGAGGAGTACCGGGCGCCCTCCGTGCTGCG
CGACACCACGGACGGCAAGGTGCACGTGTACACGCACGTGGCGCGCGACGGAGCCCTGCC
CGACGGCGCCTTCTTCGAGAAGCTCACCGCGCTCTACAACGTGCCCGCCGTCTAGTGCCT
CTGTGTTCAGCACAATCATATTAACGAACATTACATTTAGAGGGGGATCATGCCAACGAC
ACTTTAGGAGGTTACCCTTTGTTTTTGACCGCCCGCCGAGGGTGTCGCAATAACATTGAC
AAAACAAAGCCCCCAACAGAGTGGCACCCCGGGGGACATGTAACGATCCCCCTTCGCTCG
AAACCCCTGC
(2710 bp)

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