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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23177_g1_i2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		39S_ribosomal_protein_L39,_mitochondrial-like_[Bombyx_mori]
Ontology
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0004827 F proline-tRNA ligase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
Transcript
Level		FPKM:17.27 TPM:8.98
ORF EntryO_BomoMSG11227_5prime_partial:A_BomoMSG_c23177_g1_i2
Sequence
(Nucleotide)
CTGTGTCATAACCTAGTTGTTTCATTAAAAACCTTTATTTACAACAAAACAAAACAATAA
ATGAAAATGAAACGGCACGTTACTTGTTTGATGAAAAAACTAACAGAAAAAAGCCATTTT
TCCACTCTACAAATAACAAGATTTTTAAGCACACAAGAGGCGATAGAACGTCGCAGCTAT
TTGTTCACGTTAGAAAAGAAACGGCAGATAGAAAATGTCGGTAGGATCGAAAAAATCGAA
GTCCAATACAAAGGCATACCAAAAGACTGCACCTTGGTAATGAATAAAAACATTTCGACA
CCGTACGACTGTGCTAGACATCTAAGTGAATGGCACATGGAGAGCAGTGTCCTAGCTTTA
CTTGATGGAAATCTACATTGGGACATGCACAGACCACTGACTGAAAGCTGTACGCTTGAG
TTTCAAAACTACAAAGCAGCAGAACCACAGCAAGTAAACAAGGCATTCTGGCGCACATGC
TCGCTGATGCTTGGAGCGTGCGCTACCGTTGCATTCAAGGACACAGTTCCAGTACACCTA
CACAGTTTTCCACTGCCCGACATAAGAAGCGGTTCTTTCATCTATGATGTCGATCTTCCC
ACTCTAAGTGATTGGCAGCCAACTCACCAAGAGGTTTTGACCCTCGCTGCTGAGTATGTG
AAACTGTGTCGGAAAGCTGTTCCTCTAGAAAGGCTGGAAGTAGGAGAGGAGCTCGCTTTG
GAAATGTTTGTGGACAACGAGCACAAGAGCAAACAGATACCAAATATTGCTAAGACTAAC
GGTAAAGTGATATTGTACAGAGCCGGGAACCACGTTGATATATCTAGAGGACCTCTCATC
AGCAATACCGCGCAGATAGGCCGGCTGGCAGTCACCGCTGTCCACAAACTTACAGGACCA
ACGGAAGATGGTGTGAGCCAGTTGTATCGTTTCCAAGGAGTAGCCTTACCGAAAGGAGTT
GTACTGGACCACTTCGCTTTCTCGATATTAATGGACAGAGCCAAAAAGTTGAATCCAGCC
AGATCGCCTTTTTTGAAAAAAGAGGATCCTGAAATTAACGAACAAATAGAAAATGTCGCA
GCGCAGGCGTAGGATACAGTTAGTTGTATAAATAGCTTTGTAGTTAATGTAAGCCAATTA
AAATGTGTTGTATGTAAAAAAAAAAAAGATCGGAAAAGCGTCGTGTAGGG
(1190 bp)

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