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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23172_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_III_subunit_RPC8_[Helicoverpa_armigera]
Ontology
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0032481 P positive regulation of type I interferon production
GO:0043231 C intracellular membrane-bounded organelle
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
Transcript
Level		FPKM:14.40 TPM:7.49
ORF EntryO_BomoMSG11217_3prime_partial:A_BomoMSG_c23172_g1_i1
Sequence
(Nucleotide)
AAACAGAGCAGACCATAAAATCTTCAAAAACCGAAGTTTTAAATAGAATTTAATAGTAAC
ATATTTATCAAATAAACCAATGTTTGTATTAGCTGAAATGAAAGATGTTATTCGAGTTAA
TCCAGAATACTTTCGTCAAAGTCTAACTGATTCTATAACAACTTTACTCAACAGAAAGTT
AGCTAATAAGGTTGTGTTAGAAGTAGGTTTATGTATTGTACTGTTTGACATAACCAATGT
TGGACACTCGTACATATTCCCTGGAGACGGTTCATCTCACACAGAGGTGAAATTTAGATA
TATCGTGTTTCGACCTATTATTGAAGAGATACTTATAGGAAAAATAAGGAGCTGCAGTAG
AGAAGGCGTGCACGTGACATTAGGCTTTTTCGATGATATATTAATACCAGTAAATGCTCT
TCAGCATCCGTCTAGATTTGACGAAACCGATCAAGCATGGGTATGGGAATATCCTAAGGA
AGATGGAGAAAAACATGATTTGTTCATGGACTCGGGTGAATCAATAAGATTTCGAGTGAC
AAGTGAGTTTTTTGAAGAGAGCTTACCAACAGGTCCTCCAGGAACAGATTGTACAGTACA
AACGGTAGCACCTTATAGACTGATTGGAGGAATAAATGAACCAGGACTTGGACTTTTAAC
CTGGTGGGAGACACCAGATCAAGAGGGTGAAGAGGATGC
(699 bp)

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