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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23133_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		U3_small_nucleolar_RNA-associated_protein_4_homolog_[Bombyx_mori]
Ontology
GO:0001650 C fibrillar center
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0034455 C t-UTP complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:27.09 TPM:14.09
ORF EntryO_BomoMSG11161_3prime_partial:A_BomoMSG_c23133_g1_i1
Sequence
(Nucleotide)
GTCATTGTGACATAACGTAGTGCTGCTATTATCGTGCTATTATAAATTATGACAAGCTTT
GATTTTGAATTAAGGTTATATTCCATGTGTTGGCCCTGTTTATTAAATAAAAGTAAAAAT
TACGATAAAATATGGCTACTAGCGTACATCGTATTCGTTATTATAATCCCCAACCAACCC
CAGTGAATTGTATCGCTTATAATAAATTAAATAAACAATTGTCCCTCGCGAGGAAAGATT
CAAGTATTGAAATATGGGACATGACACATTTCCCATTCCTCTTAAAATTCATACCTGCAG
TAAAGGACGGCTCAGTAGAAGCTCTAGGCTGGGTGAAAGACAGACTGCTTACAACCGGAT
TAGGCGGTGCATTAGTTGAATGGAATCTTGAAGAAATGTGTATAAGAAATACAATATTAT
TAACTGGATATGCTGCTTGGTGTCTTGATGTTAGCCCAGACAATACATTAGTAGCTGTTG
GTACTGAACAAGGCTATGTCAACTTGTATAATGTTGAAAATGATGATATTATCTACAAGA
AGTTGTTTGACAAACAGGAAGGTAGAATTCTTTGCTGCAAGTTTAATGAAACAAGCAGCA
TACTTGTTACAGGGTCAGTAAATACAATTAGGGTATGGAATGTCGAGACTGGACACGCAA
CTACACGTATATCAGTAAGCAGACGGGGTAAAGAAGTTATTGTTTGGTCCCTTGTTACAC
TTGAGAACAATATTATTGCATCGGGTGATAGTTTGGGTCGACTCACACTGTGGGATGGCA
ATACAGGTGATGAGATTGAATCATTTATTAGTCATAAAGCAGACATCTTAACAATAGCAG
TGTCTGAAGACAAAAATAATTTATTCTGCAGTGGAGTGGATCCAACCATAATACAATTTA
GGAAAATTAAGAAGTCTGACTCTGCAGATGAGCAATGGGTTAAGAGTTATCAAAATTCCA
TAAATCAGCATGATGTAAGAGATATTGCAGTATTGGATCAAAAAGTATTGTCGGTTGGTG
TTGATGGATACATCTCAACATTTCATTATGTTCGAAAAGGATTTCAACGAATACCACATT
TGTTGCCAACACCCAGATCATTGGTGTGTTCTTCCAAGAAATTTTTACTTTTAAGGTACA
GTAATCATTTAGAAGTTTGGAAACTGGGAGCATTTCTAAAAGATAAATCAGGAAGGCCTG
TAGCAGAACCTGCAAATGTAATCATTAAAAACAAAATAAATACAGAAAATAATCATTCAG
ACTGCGAGAAAGTAAATGAAATGTTAAAAATATCTGAAAACCCTGTGAAACTTCTATCTC
TGCAGACAAAAGGAAAAAAACAGATTCAGTCATGTGCCATTTCACCAAATGGAGAGCTTA
TCGTTTACTCCACAGAGAGTCACACAAGGATGCTTAAATTGGATAGTGATGACGAATCGA
ATGTATATTTATCTAAAGTCATATTAAATGGTTCAATAACGACATGTAGCCATTTCGCTT
TCACAGAAGACTCTAAAGTGTTGATCGTATATAACGCGGGTACCATCAGTTTCCTTCAAG
TGGATCCTGAAGCAGGCGTCACCGTTACACAGACTATCAACACTAAAAAACATTTAAGTT
GCAAATCAATATTGCATTTTCAAATATCAAAGAAATGTCCTAGCAATAAAGTGTATTTAG
TGGTAGCGGACACACAAGGTGATATAGTAATATGGACACAAATTGGAAAGAAATTCGAAC
ACTATATAACATTGCCGAAATATCATTGTGTACCATCGGCCATGGTTGTCGATGCCGAAA
AGGAGACTTTGATAGTAGCATACGTTGACAGAAAGGTCGTAGAATATGAATTGTTCGAGA
AAAAATTCAGTGATTGGCCCGGCTCGGCCATGCCCCCCGTGTGGTACGACACGAAGCAGT
GCGTGCTGTCCGTACACCCGCACCCGAGCGGCCAGTCCGTCGTGTTCCAACACTTGAGAG
ATCTGTTCGTATTGGACAGGAAAGCGCAGTTTGAAATGGAGCCAACCAAAAAGAAGAAAT
CGGCGGACGCAGGCGAAATGAATCTAGGTTATCATATTCTTCCCATGAAGTATCTCTCCG
ATTTTTATTGGCTCGGCAAGAGTGAAGCTGTTACGGTCGAGATACTCCCAGAAAATATAA
TGTCAATGTTACCTCCCGTGGCG
(2183 bp)

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