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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23104_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		histone-lysine_N-methyltransferase_SETMAR_[Bombyx_mori]
Ontology
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
Transcript
Level		FPKM:6.51 TPM:3.39
ORF EntryO_BomoMSG11091_3prime_partial:A_BomoMSG_c23104_g1_i1
Sequence
(Nucleotide)
CTTCCGATCTCAAAGTCCTAAAATATGAACGATGATTATGTACATTTTAACAATAATATC
TTTTACATAGAAGAGAATATACCAGGACCTGACGACAACAGCCTGGAATTTAAATTCCTA
TTAAATAATTATAACTCTCAGCTCGAAAGTTATTGCAGATGTGAAAATGTTTGTTCGTAT
CCTAAATGTGAATGCTTGAAAAGGTCTGGCGGGAACAATTACGTTGTTGAACACGGTGAA
CTGCCGAAACTGAAGATAGATAGTAAAGAAAAACAAAACCTTATCTTAGAGTGCAATAAA
CAGTGCACTTGTTCTTATCAATGTGGAAATAGACTTGTACAGTTGGGGCCACTAAAAGGA
CTAATGATTAAAAAATGTGATATTGTACAAAAAGGGTTTGGTTTATTTACTAATGTTTTT
GTTCGTAATGGATCATTTATTTGTGAATATATTGGAGAATTGCTAACTAAAGACCAGGCT
TTTAAAAGATACCACCATAATAAAACAAACAAAGAGATGAATTACATATTTTGTTTAATT
GAACATTGTGGTACTGAGGTTATAGAGACTTTCTATGATCCAAGTAAATTTGGTAACATA
GGCCGCTATATTAATCACAGCTGTGAACCAAACTCTCAAATTTTACCCGTAAGATATGAC
ATGCCAATACCCAAGCTTGCAATATTTGCTTGTGAGGATATAAAACCTGGA
(711 bp)

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