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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23085_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		poly(U)-specific_endoribonuclease_homolog_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:5.47 TPM:2.85
ORF EntryO_BomoMSG11065_3prime_partial:A_BomoMSG_c23085_g1_i1
Sequence
(Nucleotide)
CCGGGACTGCGCTAGATCATACGCATTAATCAAATATGAAAATTACATTGATTTTCGTTG
TTTTTCTGGGGGTATGTCACGCTGATGACATAGCCCAGGCTGCGGGCCAGATCTTCAACA
ACATCCTTCCCAACTTGATTAGCAATCATGTGACTGGTCAGCAAGGGAACACAGCTCAAA
ACACTTTCCAGCAAATAGGCACAGTTGTCGGTGGCGTCGTTGACTATGCGAAGAAGAAGA
GCTACGAAGATTTGTTGCGCCAAGCACAAGATTCGACGACCGACGATGACCTCCTCAGAG
TTAGCGAGGAAATGTTTAATGCAGATATAAATAATGCCTTCAACTACATTCAAGTGAATT
TACAAGGCAAGACCACTCCTATGTCTAGGAATGATGAAGCACAATCGAATTTATTAAACG
TTCCTGAGAATGTATGGAGCGGACCAACAATAAGACCTTTTGTTGCACTATTCGACAACT
ATCACAAGAATGTGATCAGACCAGAGTTTGTTACGCCGAATGAAGAAACGGAACAAACCA
CTTACATCAACACTATTCTTGCTACGGGACCCATCAGGAGCCTCATTACTTTCTTAGTCA
ACAAAGGCATTACTCAGCTGAATGAGTATCCCGAACAAGTTGAGCTGCTGAGAAAGATTT
GGTTCACGAAGTACGCACGCCACTGGACCGGCCTTTGCAAATGCAGTTGCGCCTTCGAGA
ACGTGTTTATGGCTGAACTCAAATCTAATGAGGTTCTAGGTCTTCACAGCTGGTTGTTCT
TCGCTAAACGTGAATTAGATCACAAAGCCAACTACTTGGGTTACATCGACAAGCTGGATC
TTAGTGGCAAAGGACTGATCCTCAAGCAGCACTCGGTGTTGAGCGAAACGAAAGACGCGC
CCGAAGTGAACATGTTTGTTGGCACCTCCCCCGAACTGGAGACCGCTCTGTACACGCTCT
GTTTCATGACCCGCCCGGACAGACCTTGCAGACTGCGCTTCAACAACATACCCTTCACTA
TCCAAACAAAATCGATCAAAGTCGAAAACTTACCGGTCATTGACAGATCGGAAGAGCGTC
(1080 bp)

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