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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23035_g1_i2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		spliceosomal_protein_on_the_X_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:22.58 TPM:11.74
ORF EntryO_BomoMSG11003_3prime_partial:A_BomoMSG_c23035_g1_i2
Sequence
(Nucleotide)
CAAACGCTTCGCGGTAGTATATGAGCTGTCAAATCTTTTGAAAAAATGGCAGCGGGGCCT
ATTGCTGAAAGAAATCAAGATGCAACGATTTACGTTGGCGGTCTCGATGACAGGGTAACT
GAGAGTTTGTTATGGGAGCTCTTCGTGCAGTCGGGGCCAGTAGTAAATGTTCACATGCCC
AAAGATAGAGTGACTCAGACACATCAGGGCTATGGATTTGTTGAATTTATGGGTGAAGAA
GATGCTGACTATGCAATAAAGGTCATGAACATGATAAAACTATATGGAAAGCCTGTAAGA
GTGAACAAAGCATCAGCACATCAGAAGAACTTGGATGTGGGAGCAAATGTGTTCATTGGA
AACTTAGATCCTGAAGTAGATGAAAAGTTATTATATGACACATTCTCTGCATTTGGAGTT
ATATTACAGACACCTAAGGTAATGAGAGATCCTGAAACAGGAAATTCAAAAGCTTTTGCT
TTTATTAACTTTGCATCATTTGAAGCCTCGGATGCAGCAATTGAAGCAATGAATAACCAG
TATCTATGTAACAGGCCAATATCAGTTTCATATGCATTTAAGAAGGATGTGAAAGGGGAG
AGGCACGGATCAGCAGCAGAGAGATTACTTGCTGCACAAAATCCACTATCGCATGCGGAC
AGACCTCACCAGTTGTTTGCCGATGCACCACCTACGTTGATGGGGCCTGTGCTAATGGCA
CCACCGCCGCCGCCCACACCATCCCCGATGCCACCACAAGGACCTCCAATGAATGCGCGA
CCACCACCACCATTGCCTATGTCAGCGCCGCCGCCACCGCCATCTTCGATGCCTCCTCCC
GGTCCACCACCGCCTCCAGGCCCTCCACCACCACCTCCACCATTCCATCATTTCCCGCCT
CCGCCATTCGGTCCGCCAGGGTTTGGACCACCACCCCCACCTGGTGCTCGT
(951 bp)

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