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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23013_g1_i4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		luc7-like_protein_3_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:3.08 TPM:1.60
ORF EntryO_BomoMSG10965_complete:A_BomoMSG_c23013_g1_i4
Sequence
(Nucleotide)
CATTTCTCGTTTTTTATTTGATGTTAAATGTGATGAGAAATTAATACGTTTTGATTCGTA
TTGGCAACTAGTTTTATTTAAACTAATTAAGATTTTTATACTCCATAGTTTAATGTATTA
TTGTTGTGTCTGAAGTTCTAGAAAGCGTTAAAAAGTAGGATGGCGGTGCTAGCGGCAGCA
CAACTCCTAGATGAATTGATGGGCAGGCACCGGAACACCGATCCCAACGAAAAAATTAAA
AAGCCTAATTGGGAAGATCCTGAGTACTGCAAATACTACATGGTAAAGTTCTGTCCGCAT
GATCTGTTCGTTAATACTAGAGCTGATCTTGGTGCTTGTCCTAAAGTCCACGATGAAGAA
GTCAAAGAGCTTTTTGAGAAAGCCGACCCATCGTATAAGAAGTCTCAGTATGTCGAAGAG
TTTCTACGGTTCTGTAAACATATGATTAATGATGTAGAAAGGAAAATACAAAAAGGAAAA
CAAAGATTGGATCTAATGAACTCAAAACCAGAGGGCCCACCAATGACTCAAGCACAGACT
GAGAAGAATCAGGAACAGGTTTCGTTGCTGTCTGAAAAAATTACGGGCTTGGTACAAGAA
GCTGAAGAAGCGGGTATAAGAGGAGATGTAGAGCAAGCCCAGGGTTTGATGAAGCTTTGT
GACAGGCTCAAGGAAGAAAAAGAACAGCTGCTTAAACAACAAGAAAATAGCCATTGGTCT
ATGACAGCTGAACTAGCAGCTGCTCAGGAGAAACAAATGGAAGTCTGCCCTGTATGCGGA
GCCTTTCTTATTGTTGGCGACGCTCAACAGAGAATCGATGATCACTTGTCTGGGAAACAG
CATGTTGGATACTTCAAACTTCGCCAAGCTTACGAAGACATGACCGAAGCTCGTGAGAAA
GAACAACAAGAAAAAGAGAAGAGGCGTCGTGAAGAGAGGGAAAGAGAAAGAAACACTCGT
TCTGGAGGACTCGGATCCGATCGCCGTGATCGAGAACGCATGGAACGCGATCGAGAGCGG
GAGCGAGACCGCGGCGACCAACGTAGTGACCAACGGGGAGAACGCGGTGAACAACGCGGA
GGAGAACGCGGCGATCGCGTCGAACGAAGCGAGAGAGGCGAGAGGGAACGGGACAGAGAA
CGTGAGAGGGACCGACATCGCGATCGATCAAGTCGAGACGAGCGAGGCGGCCGCCACGAA
GAGCGGGATCGGGACCGTGAACGTGATCGCGACCGGGAACGAAAACATCGTAAAGAAAGA
AGGTCGTCTCACGAGCGCTCCCGTCGTCGATCTCGAGATCGCCACTAGCACTTGACTGAG
GTATCACAAAAGCACCTCGATCCGGTAAGTATAATAAATCAATTTAACAGTACGCGACGT
CCGGATACGACACACAATCAATCCATCTTATGCCATACAGTCCGATTATTTTTTTATCAC
TCATGTTTTTTTTTTCTTTTTCTTTTATTTCAACATCCGCCGACTGTTAATACAATAAGT
AATAAAGTGAACAATGTTGTTTTGCAGCTTAATGTGTAGCATACCAAAATATAACTTCGG
TATATGGCATACATATCGGGAATAAATGACCCCGTTGCACTCTCTGTAACGTAGTTGTCG
TCACACCGGCGGACATGGCAGGTATTTGATTGGTATTTTGAATAGTTTCCGAGAGCCGAG
AGCTAGAGAACTTATTTGTTAATCGTTGTTCGCGTGTGCCACGGAGGCAACGAACGATTT
ACGAATAAGATCTTCTCAGCCGTGTGCAGGTCGCTTCGTTGTCGTTATTTATTTTTGAGG
TATATCAGCGTGTCGTGTTTCGTCGTCGCGAGTGAGAGTCGTCTGGCGCCCGTCGCTAAT
GCGATGCCAGGTATTTGTTAGGGTACTTGTGTCCAACAATGAAGACAATTAATTCTATTC
TGAAATAGGGTCCAATTTTATTCCATACCGAACATTTTTATGATATGAATACATCTAATG
GCGACCATAAATTGATATAGGTAATACCTATATATTGTAGGTACTTAAAGTTAAATATAA
TTTTAAAAAATCGCTCAAATTATCCCACTAACGAGGAAAAAACAAATGCTCATGCCATTC
TCAATATATTTCTGAAATACATGAAACTTTGTTCTAATACTTGAAAAGTCCAAAATATTT
CTTAATTTAAACACTATAACATAGAAAATTACCATAAAACTGCCATTTAAAGGAGTCTTG
AAGAGCGCACTGTTGTGCTTCTTTCACAATATTGGATGCTGTGTTCACATCTACCATGTA
TTTCCAGGTACCCAAATATAGTGATGTCATATTTCTATAAAATTACATAGCATGAATGAA
TCAATAATCAAATATTCTTTAAATTGCAAGAACCGAAATATGACGTCATAATACTGAACT
AATAATAACCCCAATCCCAAAGTGGAAATGAAAAATCAATGATTAACAAGTTAAGTCCAC
TGATTACAAATATATATATATATATTTATGGAGCCCTCTCTGGGGTTAATTTCATTGATT
GATCAGTTCCACATTAGCTCTACTCAAGCTACCTTTACTAGCTTCCTCCATGGACTTTTC
AGTGGGGAAAATATGAAGGAAGATGGCCGGCTTCTCGGAGAGGACCACAGACAATGAGGT
ACTTATGAAATTAAGACACCCCCGCGAAGAGTTCAACCAGTGCAGTAATCGACCATCTGT
CTCGAGGTGACCTAGGATAGTCATATTATAATAATTATAAGATAATTTCGATGTTAGTGA
ACCTTCCAAACATTAGATGCAATGCATGTCGTCTATATTCAGATGGGCACTTTAATCCGC
CTCTTCCACACTTCTTTTCAAACAAGATTATGTAGCTAGATCGGAAGAGCGTCGTGT
(2877 bp)

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