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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c23002_g1_i2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		DDB1-_and_CUL4-associated_factor_13_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016567 P protein ubiquitination
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:20.29 TPM:10.56
ORF EntryO_BomoMSG10936_complete:A_BomoMSG_c23002_g1_i2
Sequence
(Nucleotide)
GGCATTTCTATGAAAGAGTACGGTACGGTACTTAATACTTGCCTGTTTTAGAATTTAATA
TTATGTGTTATTACTGATTTTAATGTTAAAAACAATATTGTTTTGTTACATACACAGTCT
TAGTTTTATTTGTAATCTGCTGTTAATTTTTCGGAATTAATATTTATGTCTGTTTACTAG
TTCAAATTAAGATGTCTAACGTAAAAATTAAAGTTATAAGTCGTAACCCAGAAGATTATT
TGCGCGCTACGAAACGAGATATTCAGAAAATACCTCGCAACTATGACCCGAGCTTGCATC
CACTAGAAGCACCCCGTGAATATGTGCGTGCTTTGAATGCTGTAAAATTAGAGAGGGTAT
TTGCCAAGCCCTTTATTGGTTGTTTAGATGGTCACAGAGATGGGGTTTCTACTATGGCCA
AGCATCCTAGCCAACTAGCAGTTCTAGCTAGTGGAGCATTTGATGGTGAAGTACGTATTT
GGGACTTAACTGTACGGAAGTGTACAAGAAATTTTGTTGCTCATGAGGGATGGGTGAGAG
CTTTATGTTACAATCCAGATGGAAAGCATTTTATGAGTGTTGGTGATGATAAAACTATTA
AAACGTGGAAAGCTGAAGCTGTCACAGAGGAAGATGAGGAACCCACTAATACGTTGCTAA
GCATGTCAGTGGTGTCTGGTATAACACATCATAGAAACAAACCAATCTTTGCCACCTGTG
GTGAACAATGTCAACTGTGGGAGAACACAAGAAATGAACCGATTAAAGTTTTTAAATGGG
GCGTAGATAGCTTACATCATGTTTCATTTAACCAGGTTGAATACAATTTGTTGGCTTCTT
GTGCTAGTGACAGAAGTATTATTTTATATGACTGCCGTGAATCTGGTCCTCTGAGGAAAG
TTGTATTGGAGTTACGATCCAATGCACTCTCCTGGAACCCTATGGAAGCATTCATCTTTA
CAGTAGCTAATGAAGACTATAATTTGTACACATTTGATGTAAGGAGACTAAAAGAACCAG
TGGCCATTCACATGGATCATACGTCTGCCGTGATTGATGTTGACTATGCGCCAACTGGCC
GTGAATTTGTCGCGGGTAGCTATGACAAAACTATCAGAATATTCCAGAATGACAAAGGAC
ACTCCCGAGATGTTTACCATACAAAAAGAATGCAGCGATTAACCTGCGTGAAATGGTCTC
TAGATAATAAATATGTAATGAGTGGATCTGACGAAATGAATATAAGAATGTGGAAGGCCA
GGGCATCTGAAAAACTTGGTGTGCTTAAGCCTCGTGAAAGACAAGCTCTTAATTATGCGG
AAGCCCTAAAGGAGAAGTTTGCGACGCATCCACAAGTGAAGCGTATCGCTCGTCACAGAC
ACGTCCCTAAACACATACTGAATGCGCAGAAAGAACTACGAACTATCCGAGAGAAAACGA
AGAGAAAAGAAGCAAATAGACGCGCCCACAGTAAAAAGGGGACAATACCGGTTGTTTCTG
AGAAAAAGAGACATGTCGTTAAAGAAGACGAATGATTGTGTTAATGTGAATGTTATAATA
AAATATATAAGATATAAAAAAAAA
(1584 bp)

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