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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22922_g1_i2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		loquacious_isoform_X5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:7.44 TPM:3.87
ORF EntryO_BomoMSG10788_complete:A_BomoMSG_c22922_g1_i2
Sequence
(Nucleotide)
CTTAATGATTCTTAGTGTTCAGCTGAAAGCAGTCATTAGTTATTTAGCAATTAAAAAAAT
ATATCACGTATGCCGGTGTGAATTAGAACACGTAGCCATCTTGAAAATACCGTAACCGGC
CGCCATGTCATGGATCACATGTTTCCTACGGAGCTAAGCGTATCGATCGCTATTTTCTCC
ACCGTGTTAAACAACAATAAATATAGCAGATTATTTAGTAGAATTTAGTTATTCATGGAA
GGGAATACGGTCCACCCGCATCCATCTGTGGTACCGGGTTTACCACCCGGTGTTATCCAT
GGAATGACAGTGCACGGCAGTGGACCGAACGGTGAACACATTCCTCACGGTCCAAGACGC
CGCTATCAGACCCGACCCAAACCTAATAACTTGCAAAGATTGCCTTTGGACGAGGCGGCC
AAGAGGGAAATGGAATCACTTCCTACAAAGACTCCTGTCTCTGTTTTGCAAGAGCTGTTG
GCACGTCGTGGAACTGTTCCTAAATATGAACTAGTCCAGATAGAAGGCATGATACATGAA
CCCACTTTCCGGTACAGAGTAACTGTGGCTGATTTAGTTGCAATGGGCACTGGTCGCTCA
AAAAAAGAGGCAAAGCACTCTGCAGCCAAGGCTTTACTGGACAAGTTAACTGGTGCTACA
CCAGCTGATCAGACTACCAATGGCAATGTTCCTGAAACTGGTGCTGTAGTACCTACATTT
GAAGATAAACTAATGGGTAATCCTGTTGGATGGCTTCAGGAGTTGTGTATGTCACGATTC
TGGCCACCACCATCTTACCATGCTGAAAACGATGACAATGTTAATAGACGTTTGCCCCAT
GAACGTCAATTTACGATCATTTGCACATTGCTCAAGCGCCGTGAAGTTGGTACAGGCAAG
TCAAAGAAATTAGCTAAACGGCAAGCTGCCTACAAGATGTGGCAGGCCTTACAGGACAAC
CCACCAGAATCCTTCCAGAATGATGATGAGGGCGGTGTTGCGGCCCGTTATGCCGATTTG
AAAGATAGTAAAATCTCCACATTGACCACGAGCCATAGCCATAAAGTGTCGCAGTTCCAC
AAACATCTCAAACAGTCTGTTGGCCCCAACCTGGCCAAGTTGCAGGTGACACCACTAAAC
AATAAGGATTTTAACTTCGTTCAGTTCTTGCAAGAAATAGCATCAGAGCAATCTTTTGAG
GTGACCTATGTCGACATAGAAGAAAAGTCTATGACTGGTCTATGTCAGTGTCTTGTCCAG
CTTTCCACATTGCCAGTAGCTGTATGCCACGGAGCCGGCCTCACCAGCAAGGATGCCCAG
TCATCTGCTGCTCAGAACGCCTTGGAGTATCTCAAGATTATGACCAAAAAGTGAAATTTT
CAACATCTTACGACATCAGCAAAGACCAGTGCGACGACCTATGCATTTGATCTATGGGCT
CTAACGTTATGAGATTTAATTTTAATGCAGGCCATATCACTATGTGTTTTGTATTGATGT
CGTTAGGTTTTGAGCCTTCATATTGTTGCATCACTTTCCATATGAATAATGGCATTAATA
GTACGCATCTATGTACCAATAGTACTTTGGGCTATGCTTTATAACTGGCATGTTTGCAGT
AACCAACTTGTTTTTTTTTTTTTGGTTAATTTATGGTAGGCAGTTTGAAACTTATAGCTA
AGATAAGTGAACGAGCTCACGGCCAATCTTGTGTTAAGGAGTTACTGGAGCCTATATACT
TCACTGAGATACTATTTTCAACTCTGTTATTGTTCCCCCGTTTCAAGAGATAATTTTCGC
GATAGCTATTCAATTCTATAATTAACTCCTCACTGAAGTGTTAACAAAGTGCTGCGATAT
GAGGTTTATCAACCGAAGTTTAAAAACCGTTCTTAGCAGTCAATTTATTATGTATTCCCT
AGACATTTATTTCCACCAAGAGCAATAAACATTTAAGCGATTTTAAGCGAAACGGCCGTA
AAAAAAGTGTCACTCTGGCAACTAGCATTGTGATGAAATTAAATCCTTTAATAATTTGCA
AGTAAAAGTTCATTATTTATTAATAAAACTACTGCCAATGTGCGAGGATAAATTGCATAG
CCCGTAATCTTAAAAAACAAAGTATGGAGTGATTTGTCATAAAATACAAGCTATACTTTG
CATAGAATTAGTGTAATTTTCCCAGCGTGGAAATTACGTGTTATAAAAATGTAAAAAAAA
TGAAATAATATGAAAATACAAAAAAAAGTGTGGATTTACATATATTTCCAGTTTAATATT
CAGCATCTTAGGCATGTTTTTTGCATTCATATTTAATTATTAAAGTATAATCTCAATCTT
AGCTTTTAATCTATTTTATCTATAAATTAACACTATTATTGCGGCGAAGTCAGTATGTTT
GACTTATTTCGTAAATTCATGTTTAGGAACTATGAATTTTAACTATCATTGGTAAGCCTT
TTTAATATGCTGAGCATTAAACGGAAAATAGTTTCAGCTAGTGTCTTGTTGACGAACTGC
CCGACCTTTGCTTTGTAATAAGCTCCGACGTAGCAATTAATTCACTTGAACTTTAAGAAC
TTTTTACAAAGTGCAAGGGTTGGAACATTGATGGTATTGAAGGATTACAGGTCGTTGTTC
GTTTTGTTTGATACCAGTGATTGTGAGTTTTCTTTTGTGTACATGATGGAAAACTTTGCA
GGGAAGTAGAATACTAAATGTATGAGTGAGATGCATCACTCACTGTAAAGAGTTTGTAAA
GAGAGGATCCCTTGCCTGTGAAAATGGGCATTATTTTAATGCAAAGTATAGAGGTTGTAA
CAATTTGTACCTGTACAGTGTCGTCGTCGATGTTTGTGATCCCGGCACCGACGAGGAACC
TGCACGCACCAAGTTTCTTTTAAATTGAATGGTGTGAGTTCAACCTGCCCTTATAAAACA
TCGCACTGTTCAAGTTAGAAAAGACTACTCGAGTAAAGGATTGGAGTTCTGTTCAACCAA
GACCCAACTAAATAAAAACTAATATTTTGTCCGGCCGTAAGGACTATGATTGTTCCACGT
TTATTTTATTTTTTCTTTAGTGAGTCTTGGTTTTACTTATTGTTATTAATTATAATTAAG
CTCTAAATATAATAATATCATGGCTTTTTAACATTTGTCACACCTGC
(3167 bp)

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