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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22922_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		loquacious_isoform_X3_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:23.09 TPM:12.01
ORF EntryO_BomoMSG10787_complete:A_BomoMSG_c22922_g1_i1
Sequence
(Nucleotide)
CTCATTTCACATAAATTTAATGTGCAGGTTACATAGGTTGTTTTACGAAACTGAAGATCT
AATTCTGTTCTCTTTTATTTTTCGTATTGTATCCGTTTCATTTTCAATAGCAAATTTCGA
TAAATACATTTGTAACTACGGCTGTGGGAAAAATGGAAGGGAATACGGTCCACCCGCATC
CATCTGTGGTACCGGGTTTACCACCCGGTGTTATCCATGGAATGACAGTGCACGGCAGTG
GACCGAACGGTGAACACATTCCTCACGGTCCAAGACGCCGCTATCAGACCCGACCCAAAC
CTAATAACTTGCAAAGATTGCCTTTGGACGAGGCGGCCAAGAGGGAAATGGAATCACTTC
CTACAAAGACTCCTGTCTCTGTTTTGCAAGAGCTGTTGGCACGTCGTGGAACTGTTCCTA
AATATGAACTAGTCCAGATAGAAGGCATGATACATGAACCCACTTTCCGGTACAGAGTAA
CTGTGGCTGATTTAGTTGCAATGGGCACTGGTCGCTCAAAAAAAGAGGCAAAGCACTCTG
CAGCCAAGGCTTTACTGGACAAGTTAACTGGTGCTACACCAGCTGATCAGACTACCAATG
GCAATGTTCCTGAAACTGGTGCTGTAGTACCTACATTTGAAGATAAACTAATGGGTAATC
CTGTTGGATGGCTTCAGGAGTTGTGTATGTCACGATTCTGGCCACCACCATCTTACCATG
CTGAAAACGATGACAATGTTAATAGACCAGTTTCAGGTTTGCCCCATGAACGTCAATTTA
CGATCATTTGCACATTGCTCAAGCGCCGTGAAGTTGGTACAGGCAAGTCAAAGAAATTAG
CTAAACGGCAAGCTGCCTACAAGATGTGGCAGGCCTTACAGGACAACCCACCAGAATCCT
TCCAGAATGATGATGAGGGCGGTGTTGCGGCCCGTTATGCCGATTTGAAAGATAGTAAAA
TCTCCACATTGACCACGAGCCATAGCCATAAAGTGTCGCAGTTCCACAAACATCTCAAAC
AGTCTGTTGGCCCCAACCTGGCCAAGTTGCAGGTGACACCACTAAACAATAAGGATTTTA
ACTTCGTTCAGTTCTTGCAAGAAATAGCATCAGAGCAATCTTTTGAGGTGACCTATGTCG
ACATAGAAGAAAAGTCTATGACTGGTCTATGTCAGTGTCTTGTCCAGCTTTCCACATTGC
CAGTAGCTGTATGCCACGGAGCCGGCCTCACCAGCAAGGATGCCCAGTCATCTGCTGCTC
AGAACGCCTTGGAGTATCTCAAGATTATGACCAAAAAGTGAAATTTTCAACATCTTACGA
CATCAGCAAAGACCAGTGCGACGACCTATGCATTTGATCTATGGGCTCTAACGTTATGAG
ATTTAATTTTAATGCAGGCCATATCACTATGTGTTTTGTATTGATGTCGTTAGGTTTTGA
GCCTTCATATTGTTGCATCACTTTCCATATGAATAATGGCATTAATAGTACGCATCTATG
TACCAATAGTACTTTGGGCTATGCTTTATAACTGGCATGTTTGCAGTAACCAACTTGTTT
TTTTTTTTTTGGTTAATTTATGGTAGGCAGTTTGAAACTTATAGCTAAGATAAGTGAACG
AGCTCACGGCCAATCTTGTGTTAAGGAGTTACTGGAGCCTATATACTTCACTGAGATACT
ATTTTCAACTCTGTTATTGTTCCCCCGTTTCAAGAGATAATTTTCGCGATAGCTATTCAA
TTCTATAATTAACTCCTCACTGAAGTGTTAACAAAGTGCTGCGATATGAGGTTTATCAAC
CGAAGTTTAAAAACCGTTCTTAGCAGTCAATTTATTATGTATTCCCTAGACATTTATTTC
CACCAAGAGCAATAAACATTTAAGCGATTTTAAGCGAAACGGCCGTAAAAAAAGTGTCAC
TCTGGCAACTAGCATTGTGATGAAATTAAATCCTTTAATAATTTGCAAGTAAAAGTTCAT
TATTTATTAATAAAACTACTGCCAATGTGCGAGGATAAATTGCATAGCCCGTAATCTTAA
AAAACAAAGTATGGAGTGATTTGTCATAAAATACAAGCTATACTTTGCATAGAATTAGTG
TAATTTTCCCAGCGTGGAAATTACGTGTTATAAAAATGTAAAAAAAATGAAATAATATGA
AAATACAAAAAAAAGTGTGGATTTACATATATTTCCAGTTTAATATTCAGCATCTTAGGC
ATGTTTTTTGCATTCATATTTAATTATTAAAGTATAATCTCAATCTTAGCTTTTAATCTA
TTTTATCTATAAATTAACACTATTATTGCGGCGAAGTCAGTATGTTTGACTTATTTCGTA
AATTCATGTTTAGGAACTATGAATTTTAACTATCATTGGTAAGCCTTTTTAATATGCTGA
GCATTAAACGGAAAATAGTTTCAGCTAGTGTCTTGTTGACGAACTGCCCGACCTTTGCTT
TGTAATAAGCTCCGACGTAGCAATTAATTCACTTGAACTTTAAGAACTTTTTACAAAGTG
CAAGGGTTGGAACATTGATGGTATTGAAGGATTACAGGTCGTTGTTCGTTTTGTTTGATA
CCAGTGATTGTGAGTTTTCTTTTGTGTACATGATGGAAAACTTTGCAGGGAAGTAGAATA
CTAAATGTATGAGTGAGATGCATCACTCACTGTAAAGAGTTTGTAAAGAGAGGATCCCTT
GCCTGTGAAAATGGGCATTATTTTAATGCAAAGTATAGAGGTTGTAACAATTTGTACCTG
TACAGTGTCGTCGTCGATGTTTGTGATCCCGGCACCGACGAGGAACCTGCACGCACCAAG
TTTCTTTTAAATTGAATGGTGTGAGTTCAACCTGCCCTTATAAAACATCGCACTGTTCAA
GTTAGAAAAGACTACTCGAGTAAAGGATTGGAGTTCTGTTCAACCAAGACCCAACTAAAT
AAAAACTAATATTTTGTCCGGCCGTAAGGACTATGATTGTTCCACGTTTATTTTATTTTT
TCTTTAGTGAGTCTTGGTTTTACTTATTGTTATTAATTATAATTAAGCTCTAAATATAAT
AATATCATGGCTTTTTAACATTTGTCACACCTGC
(3094 bp)

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