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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22907_g1_i3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		vesicle-associated_membrane_protein-associated_protein_B_isoform_X2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006874 P cellular calcium ion homeostasis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006986 P response to unfolded protein
GO:0006987 P obsolete activation of signaling protein activity involved in unfolded protein response
GO:0007029 P endoplasmic reticulum organization
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019048 P modulation by virus of host process
GO:0019899 F enzyme binding
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0033149 F FFAT motif binding
GO:0042803 F protein homodimerization activity
GO:0044790 P suppression of viral release by host
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044828 P negative regulation by host of viral genome replication
GO:0044829 P positive regulation by host of viral genome replication
GO:0045070 P positive regulation of viral genome replication
GO:0046725 P negative regulation by virus of viral protein levels in host cell
GO:0046982 F protein heterodimerization activity
GO:0048487 F beta-tubulin binding
GO:0090114 P COPII-coated vesicle budding
Transcript
Level		FPKM:2.17 TPM:1.13
ORF EntryO_BomoMSG10778_complete:A_BomoMSG_c22907_g1_i3
Sequence
(Nucleotide)
GAAGAGACAACGCATGCGCAGTGCTCTGCGCATGTCTATTCGTCATTCCACAATTCTCGT
TCGCTTTGGCCGACATCGCGGAAAGATATTTTTTCTCAATCTGTTAAATTTTGCCAACGA
GATACTGTGCTTATAGTACAATAAAATGCCTAACCAAGTGCTAACTATCGAACCACAAAA
TGAATTAAAATTTAAAGGGCTCTTTGAGCATGGTTGCACAACCTACATGAGACTAACGAA
CCCGACAAACGATACAGTGCTATTCAAGATCAAAACAACAGCACCAAAGAAATATTGCGT
GCGTCCCAATTCTGGAGTTCTTGCGCCAAATTCGAAACAAGAAATCGCAATTACTCCGCA
ACCTGTATATTTGGACCCCAATGAAAACCACAAGCATAAATTTATGGTCCAAAGTGTAAT
AGCTCCAGAAGGAAAAACCAACATTGATCAAGTGTGGAAGGAGATAAGCCCCGAGCAACT
CATGGACTACAAGCTAAAGTGTGTCTTTGAAACTCCGCGTGGCACTAATCTTAACGATTC
TGGCGATAATGCAGCCCAGAACGATGTCACCAAGAAAAGAGTTGCAGTCGCAGAAGACGC
TAAGCCTGCCGCTAAGGACGCCGTGAAAGATCTCATCCAGCATGAAGATAAAAATAAGGA
TGATGATCACCCTGTTGCATCAATAAACCTAAAAACGACTAATACCAAGTCTGAAAACGT
TGAAAGCGATCTGCAAAAGGCGACTTTAGAAGTAATACATTTGAGAGAAGAGGAAAGCAA
GTTAAGACATGAAAACCTGCAATTAAAAGAGGAGTTACTGCGCTTGCGTCAGTCGGCAGG
CGGGGACGGGCGCGTCTCGCGTCCTCACTCTTACGGTCCGGAGAAGTCGACGCAAGTCAC
GATTATGCCGTGGGTCGTCACCGCAATATGCATGGCCATCATTGGCATCATTATTGGCAA
GTTCTTCATGTGAACAGCCCCCAGGCCCCGCGGTCACCTGGCAACACCTCACAGATACCG
CTCTTACGACACTCCCGATGCATCCCTCTCGCAAGGCAGCTTACGTTTTCGGTCAATAGT
TTCTATGTGCGGCTCACGATTTTGGATGAACTTGGTTTACACAGGATCCGTGACGCTGTA
TTTGTTTTTGTTGTTGTTTTGCTTAATTACCTGCTTTCTCTGCTTTAATTTGGAGGGACG
TAGATTTCGTTCTCGGTTGCCGACAATTTTATTCAGATTTGTTTTCGCTATATCGGGATA
ATCGTAACATCACCGATTATCGATTCTTTATTCAGACTACTAAATGTTTGAGTGGTGGGT
GCCACAGTTTACTTTCTCTATTAAGAACTTCCATTCAGCAATAAACTTTGAAGTAGGCTT
AGAATTAATGTATATTTTGCATTTTATTATGTCCGATCAAGATATGTAATTGCTCTTGGA
TTCTTTAAAATAATAAACATTTAAAGTGTTCACCAGAATGATTACTTGTGAAGTGAACAT
GAATATTTAAACTTCATCGTGATATAGTCATCAGCATCCACGAAGCTATAGCGCACGGGT
TTAGTATGAATAGAGATCTAGAACCAGCTTGTAAACGTGTCGAAATTTCTTATTTAATTT
TTTTTTTTTAAATAATATAATAAAAGTTTCAACTTTTTAACAGCGTCTCATGTCTTTTAT
AATACGAGTTAACACAATTGAAAAAGTTTGTACTGTGACGTCACAATTCTTATTGTACGA
ACGTATTCATTTTTAATTGTGTTTTGTTCACGTTGTTATAAACTATACATTCTATTATTA
TCGTTACACCTGTCATAACTTCCAGCACGAATGTAATACTTATAGTAACATTGTTATAAT
AATGAAATATATATTTAAACATAAATAAACGGTATATATTTGTTAGCAGCACGTAAATAC
AATTTAGTCATTTTGTATATCGTGTTTCGGGATTATATTTACAATATTGTAGAGATCATT
TAGCGGAACACGTGCCTAGTGAAGTGATACCATGTAAACTTTATCTAATTCGATTTAAAA
TTACCACATACACACGTGTCGGGTTGAACTTACAAACTGGAGTAATTAAATTTTAAATAG
TTGTTTTCGACCTAAATTATAAGATATTCCGTTTCGATGTGTTTAATTCTTAACCAGATC
TAGTTGTATCTGATCTCATATTATTATTATTATTCTAAATGCAATAATTAATATAAGATG
GTAAACATTATATTATCTAAAGCACTCCAGTTGTATGTGTCTGCAAAGAAATATTTCAAA
AATCATTTTCAATCTGTTTTTTTTTTTTCGATTCGTGATCCGTTGAAAACTGTAGCTGTG
TTGTATTATTATATTTTGTAATGTATTATGGACGAAATTATTTTACTATTGTTAATCTTC
ACAGTGCCTCGGGACGATACCATCTGGTGATGCGATAATAAAGATAAAAAATATTAATAA
TGAATAGATAAAACTTAATTATATTAAGTGTGAGAACATAAATTAAGCTTCCTTAGATTG
GAAATATTATTGTCAGTTTAAAATCAGTATTCACGAAATTGTGTATTAGCTATTGGGTGG
GTGCCTCATTAAAAACTAGCTTAGTACTAATTTAATCTCTGAAACATTAAATTCTATGGC
GTTTAGCATTTCTATTGTAAAACATAATAAAAATATTGACCTTTCTATTAAATTAGTTAA
ACAAAAAAGTTTCGTTATTTGAGTGTTTTGACTAAATTAAAATAGGTAAGGTTCTGTTAT
ACGTTTTCAAATTTATAAACTCTTCCATCGTATAAAAGAAGACGTTTATGAAAACAAGTT
GACTGCAAGCATGCTTTGTATCGAAAGCCGATTTCAGTTTCAGTCGTATTTTCTAAGAGT
TGCGAAATTTATTTACTCGTGGTTGCCCATTCTGTGGCGCGACCTGCTGACCCATAGCAG
TTTTATTAAACGGTAATGCGTTTCGTTTTATTCAAAGGCTCTTGTCTACTCTTATCTCTG
GTCTTCGGTGATATGAAGCCCCACAAGCCATTACGCTGCTTTGCCACAGAACTGTCTGCG
AGGTGTTGTCTTTTGTCCGATAACGATAAATAATACAAGAGTATGCAATGATGTTAACAC
GCTAACTTCCGTGTAGGTCACCGGTGCCCTAC
(3152 bp)

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