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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22907_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		vesicle-associated_membrane_protein-associated_protein_B_isoform_X3_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006874 P cellular calcium ion homeostasis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006986 P response to unfolded protein
GO:0006987 P obsolete activation of signaling protein activity involved in unfolded protein response
GO:0007029 P endoplasmic reticulum organization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019048 P modulation by virus of host process
GO:0019899 F enzyme binding
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0033149 F FFAT motif binding
GO:0042803 F protein homodimerization activity
GO:0044790 P suppression of viral release by host
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044828 P negative regulation by host of viral genome replication
GO:0044829 P positive regulation by host of viral genome replication
GO:0045070 P positive regulation of viral genome replication
GO:0046725 P negative regulation by virus of viral protein levels in host cell
GO:0046982 F protein heterodimerization activity
GO:0048487 F beta-tubulin binding
GO:0090114 P COPII-coated vesicle budding
Transcript
Level		FPKM:3.62 TPM:1.88
ORF EntryO_BomoMSG10777_complete:A_BomoMSG_c22907_g1_i2
Sequence
(Nucleotide)
GAAGAGACAACGCATGCGCAGTGCTCTGCGCATGTCTATTCGTCATTCCACAATTCTCGT
TCGCTTTGGCCGACATCGCGGAAAGATATTTTTTCTCAATCTGTTAAATTTTGCCAACGA
GATACTGTGCTTATAGTACAATAAAATGCCTAACCAAGTGCTAACTATCGAACCACAAAA
TGAATTAAAATTTAAAGTTAATTTCTCAGGGCTCTTTGAGCATGGTTGCACAACCTACAT
GAGACTAACGAACCCGACAAACGATACAGTGCTATTCAAGATCAAAACAACAGCACCAAA
GAAATATTGCGTGCGTCCCAATTCTGGAGTTCTTGCGCCAAATTCGAAACAAGAAATCGC
AATTACTCCGCAACCTGTATATTTGGACCCCAATGAAAACCACAAGCATAAATTTATGGT
CCAAAGTGTAATAGCTCCAGAAGGAAAAACCAACATTGATCAAGTGTGGAAGGAGATAAG
CCCCGAGCAACTCATGGACTACAAGCTAAAGTGTGTCTTTGAAACTCCGCGTGGCACTAA
TCTTAACGATTCTGGCGATAATGCAGCCCAGAACGATGTCACCAAGAAAAGAGTTGCAGT
CGCAGAAGACGCTAAGCCTGCCGCTAAGACTAATACCAAGTCTGAAAACGTTGAAAGCGA
TCTGCAAAAGGCGACTTTAGAAGTAATACATTTGAGAGAAGAGGAAAGCAAGTTAAGACA
TGAAAACCTGCAATTAAAAGAGGAGTTACTGCGCTTGCGTCAGTCGGCAGGCGGGGACGG
GCGCGTCTCGCGTCCTCACTCTTACGGTCCGGAGAAGTCGACGCAAGTCACGATTATGCC
GTGGGTCGTCACCGCAATATGCATGGCCATCATTGGCATCATTATTGGCAAGTTCTTCAT
GTGAACAGCCCCCAGGCCCCGCGGTCACCTGGCAACACCTCACAGATACCGCTCTTACGA
CACTCCCGATGCATCCCTCTCGCAAGGCAGCTTACGTTTTCGGTCAATAGTTTCTATGTG
CGGCTCACGATTTTGGATGAACTTGGTTTACACAGGATCCGTGACGCTGTATTTGTTTTT
GTTGTTGTTTTGCTTAATTACCTGCTTTCTCTGCTTTAATTTGGAGGGACGTAGATTTCG
TTCTCGGTTGCCGACAATTTTATTCAGATTTGTTTTCGCTATATCGGGATAATCGTAACA
TCACCGATTATCGATTCTTTATTCAGACTACTAAATGTTTGAGTGGTGGGTGCCACAGTT
TACTTTCTCTATTAAGAACTTCCATTCAGCAATAAACTTTGAAGTAGGCTTAGAATTAAT
GTATATTTTGCATTTTATTATGTCCGATCAAGATATGTAATTGCTCTTGGATTCTTTAAA
ATAATAAACATTTAAAGTGTTCACCAGAATGATTACTTGTGAAGTGAACATGAATATTTA
AACTTCATCGTGATATAGTCATCAGCATCCACGAAGCTATAGCGCACGGGTTTAGTATGA
ATAGAGATCTAGAACCAGCTTGTAAACGTGTCGAAATTTCTTATTTAATTTTTTTTTTTT
AAATAATATAATAAAAGTTTCAACTTTTTAACAGCGTCTCATGTCTTTTATAATACGAGT
TAACACAATTGAAAAAGTTTGTACTGTGACGTCACAATTCTTATTGTACGAACGTATTCA
TTTTTAATTGTGTTTTGTTCACGTTGTTATAAACTATACATTCTATTATTATCGTTACAC
CTGTCATAACTTCCAGCACGAATGTAATACTTATAGTAACATTGTTATAATAATGAAATA
TATATTTAAACATAAATAAACGGTATATATTTGTTAGCAGCACGTAAATACAATTTAGTC
ATTTTGTATATCGTGTTTCGGGATTATATTTACAATATTGTAGAGATCATTTAGCGGAAC
ACGTGCCTAGTGAAGTGATACCATGTAAACTTTATCTAATTCGATTTAAAATTACCACAT
ACACACGTGTCGGGTTGAACTTACAAACTGGAGTAATTAAATTTTAAATAGTTGTTTTCG
ACCTAAATTATAAGATATTCCGTTTCGATGTGTTTAATTCTTAACCAGATCTAGTTGTAT
CTGATCTCATATTATTATTATTATTCTAAATGCAATAATTAATATAAGATGGTAAACATT
ATATTATCTAAAGCACTCCAGTTGTATGTGTCTGCAAAGAAATATTTCAAAAATCATTTT
CAATCTGTTTTTTTTTTTTCGATTCGTGATCCGTTGAAAACTGTAGCTGTGTTGTATTAT
TATATTTTGTAATGTATTATGGACGAAATTATTTTACTATTGTTAATCTTCACAGTGCCT
CGGGACGATACCATCTGGTGATGCGATAATAAAGATAAAAAATATTAATAATGAATAGAT
AAAACTTAATTATATTAAGTGTGAGAACATAAATTAAGCTTCCTTAGATTGGAAATATTA
TTGTCAGTTTAAAATCAGTATTCACGAAATTGTGTATTAGCTATTGGGTGGGTGCCTCAT
TAAAAACTAGCTTAGTACTAATTTAATCTCTGAAACATTAAATTCTATGGCGTTTAGCAT
TTCTATTGTAAAACATAATAAAAATATTGACCTTTCTATTAAATTAGTTAAACAAAAAAG
TTTCGTTATTTGAGTGTTTTGACTAAATTAAAATAGGTAAGGTTCTGTTATACGTTTTCA
AATTTATAAACTCTTCCATCGTATAAAAGAAGACGTTTATGAAAACAAGTTGACTGCAAG
CATGCTTTGTATCGAAAGCCGATTTCAGTTTCAGTCGTATTTTCTAAGAGTTGCGAAATT
TATTTACTCGTGGTTGCCCATTCTGTGGCGCGACCTGCTGACCCATAGCAGTTTTATTAA
ACGGTAATGCGTTTCGTTTTATTCAAAGGCTCTTGTCTACTCTTATCTCTGGTCTTCGGT
GATATGAAGCCCCACAAGCCATTACGCTGCTTTGCCACAGAACTGTCTGCGAGGTGTTGT
CTTTTGTCCGATAACGATAAATAATACAAGAGTATGCAATGATGTTAACACGCTAACTTC
CGTGTAGGTCACCGGTGCCCTAC
(3083 bp)

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