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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22894_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_54_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:20.24 TPM:10.53
ORF EntryO_BomoMSG10755_3prime_partial:A_BomoMSG_c22894_g1_i1
Sequence
(Nucleotide)
ACGAGATGTCATGTCATCAGTTTTTAAAAAAAATGTAGCTATTTTTTTGCCTAAGTTCAA
GTTTTCTTAGAGTCAATATTCGAAATTCATAAAGAAAAGTGTACTTATACATACAGAAAT
CAATCTATACTAAAAATGTTATGGAGGAAAATTCATCATCAAGCACGAATCCAGCATGGC
AAAACTGTTCACACTGCCCCAGCCTTGTTTTCAGCACAGCAGCAGAATTTGAAAGACATA
TACTAGATAAGCACTCCATAAAAGAGGGAACCATAATCCTTTGTCAATATGGACAAAATG
GGATGTGCTCTGCATTACAATTTGGAGATTTACGGAAAGCTGGTTTTAAGTACCACATCC
GAGAATATCATACATATACCAGGACACCTAATGAGTCTTGGACATTCTATTCTTCTTCAC
AAAATCTCCCTGCAGTACTGAATGATCCGAATAGAGGTAAGCAGAGCAATTTCTTCACGA
AAACATGGGGTGACAGCTTTGTGGATAAAATTGATATACTTCCTAGTCCTTATTTACCAG
ATGTAACATTGACACATTTTGAATCTTATTGTAAAAAAATTGCTAAGAGGTACCGAAGAC
ATTTAAGACTAAAAGAAAATTTGCCAGTTAAAAATAAAACTGCAATCATAGAAAATGATT
GTGAAATACCAGATATATTCTATGAACCAGGTTTGCCATTAAATGATCCAGTGGTTTTCA
GTAAAGTTTTTCCAAACCTTTGTAGTTCTGTAGATAATGATGTAGCTATAAGATCTCTGC
AAGAAACATTGAGCACTTATCTGGATGTAATAGAAATGAATATTTCAAAGCAAGTAGCAC
AAAGATCAGATGCATTTTTTCATGCTATGCTTTCACATGATACAATAATGGAACAGATGG
CAAAAGCTGTCAATACTGTTCAGAAAACAAGAAAACATATTAACCAAGTTAAAAAGAATC
TGACTGAATGTCCATTGAAATTAAAAAGCTTAACTAGGATAAATTGTAATCTTGGTCATG
TTCATGAAATTCTTAAGCTAATGTCAACAGTACAACAGACTCAACCTATGATTCAGCTAT
TACTCAGTACATCGGACTATGTTGCTGCATTGGATTTAATAGGCTCTACACAAAAAGTAT
TGTCAACTCGACTTACAGGCATACAGGCATTTAGACACTTATCTCCACAATTAACTGAAA
TGAAAAGGTTAATTCATAAAATGTTAAGTAATGAATTCCTAAAATTCATTGTATGTGACT
TAAATAGACCACTAATAGATGAAAGTGACATTCCTGAAAAAGATAAAATTATATCAATTG
TTTCTGGCATTCTTCGTCTCAAAGAATTTGATTTTCTAGACACATTTAAAATGGAAGCTA
TGACATCTATTCAAGCTACAATAAAACAATCAGTAATTGAAATTATTTCACAGCGAGATG
GTTGTTTTGAAATTGTTTTAAGAGGATCAAATGCAGATAACATGTGGCTATTGTGCAACG
AAGGCATTTTATTTTTGCAAAAAGTGACTCCAAACTTAGTTATGTTATTTAAAAGAATAC
TATCATTAACAAATTTGATTATAGATGTAAGTCAAATGGAAGATGTTAATGGGAGTGATA
ATGAAGAGATTTGGTCAGCTGAAGAATTGACATCTATTGAAGACAAATTGAAAAAAATGA
TTGTTTCATTGTCAGATTACTGCAATGAAAGATGTGCTAACCTAATTGTAACTAAAACAG
ACAAAGATTATGTGTGTTCTGATATGTCACAGTTATCTCTCCTATCAAATTTGATTAAAG
AATTTTGCACCAAATGTGAGGATGTAACCGGATATTGTAGTAATGCCATGAATTTGGCTC
TAAGGAGCTTTGCTATGAAGTATATACAGACACTTCACACTGAACGCAGATCTCAATTAA
CAGCTTCTCTAAATGCTGAACGATGGAAAACTGCAGATGTTCCATATGAATTGCAAAGTG
CAATCACAAAAATATGTGAAATTCAAGAAATACCTCCTAATTTACTGTATGAAAGTGGGA
AACCAGACGGAAAATATCTTTTTATAAACAAAGAAAGCTATGCTCTGGTAGGGACAGTTC
AACTACTTATAAAAATTTTATTGGAATACTGTGATGCAACCAGACAATCTCCCATTATAG
TTCAGTATTTAGTTCATTGTATGTTAGAATTATTAAGATTGTTTAATTCTCGGTGCTGCC
AACTTGTTCTCGGTGCAGGGGCAATACAAAGTGCTGGACTTAAAACTATTTCTACATCCA
ATTTAGCTCTAGTATCTCGATCTTTACAGGTTATATTATGGTTTTTACCTATGATAAAAC
AGCTGTTAGAGAAAATACATTCTTCTGAGGTATCATTGAGCGGTTTTGTTGCTATTGAGA
GTGATATTGCTAGCCATAAACAGGAAATAGAAAATAAGATTTGCTTAATTGTAAGTAATA
TGTTATGTTCTCAATTAACAGGGTGGGATGCAAAGCCCCCAGTTCCTTCTCAAACATTCC
GCAATATTTCAAAACATTTAGTGAAGTTACATGAAGCATTAATTGATATTTTGCCACCTG
AACAAATAAAGTTTATATACAAACGAGTACATGATAATTTTAAAGATAAATTAAGAGAAC
AACTAATTAAAATGAATATAGTTGCTAATGGAAGCCCCCAGATCGGAAGAG
(2691 bp)

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