SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22881_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MARCH6_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0070936 P protein K48-linked ubiquitination
GO:1990381 F ubiquitin-specific protease binding
Transcript
Level		FPKM:5.06 TPM:2.63
ORF EntryO_BomoMSG10728_5prime_partial:A_BomoMSG_c22881_g1_i2
Sequence
(Nucleotide)
GTCAAACAAAGAGAAAATGTAATATGTTCGGTACCTACCTACCTACTTACAAGTTTTTCT
ATCTTCGATAAAAAGTGTCGTCAATTTGTGTTTTGTGTTGTTTTAGAGCAGGGTTTCGCT
CTGTGTGGTGTCATAACTATTAGTTACAAACTCAATAAATATCTTTATAGAAGAATTCCA
AGCACCAGATTTTGTTATTCGACAGTGTTGATCAAGTCTACAAACTGGATAATAGATAAT
GATGGACTCGGACTCGTCCGGCGCCGACTTCTGCCGGTTTTGTCGCTCGGAGGCAACGTC
GGATCGGCCTTTATTCCACCCTTGCATCTGTACCGGTTCGATTAAATGGATCCATCAGGA
ATGCTTAGTGCAATGGATGAGATACTCTCGGAAGGAAATCTGCGAGCTTTGCGGACATCG
CTTTTCTTTTATGCCGATATATTCTCCGGACATGCCTCGCAGGCTGCCTATCCGCGATGT
AGTGGGCGGCCTGGTGATGTCCGTTGCGTCAGCCGTAAAGGACTGGCTCCATTACACCCT
GGTGGCTTTAGCCTGGCTCGGTATCGTACCGCTTACGGCTTGCAGGACATATAGGTGCTT
GTTCTCAGGCTCCCTGGGACCAGTTATTTCCTTACCATTTGAGATTGTTTCTGCTGAGAA
TCTTGCCAAAGATGTTTTCTCAGGATGTTTTATTGTGACATGTACACTTTTCTCTTTTAT
TGGACTTGTGTGGTTGAGAGAACAAATAATGCACGGTGGAGGTCCAGACTGGATGGAAAG
AGAAAATATACCAGTTCCCCCACCAGAGGATTTTGTACAGCCTGAGAATAATAATGAAAG
AGTTAATGAAGTTGGAGGGGATGACGGTGGAGCTCGTGAAGAAGGTAATGGAGTTGGTAA
CGGTAATGGTGAAGGAGGTGGTGAAGAACCATTAGTGGGCGATGAAGCGAATTGGAATCC
AATGGAATGGGATAGAGCTGCTGCTGAAGAATTGACATGGGCCCGACTATTAGGTCTTGA
TGGGTCCATGGTCTTTCTAGAGCATGTGTTTTGGGTGGTATCCCTCAACACTCTGTTTAT
AGTGGTGTTTGCATTCTGTCCTTATCACATAGGACGACTTGGGGCTGCCTTAGCAGGATT
AGCAAGAT
(1148 bp)

- SilkBase 1999-2023 -