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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22820_g1_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		LSM1-like_protein_[Bombyx_mori]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000339 F RNA cap binding
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0019827 P stem cell population maintenance
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0045665 P negative regulation of neuron differentiation
GO:0071044 P histone mRNA catabolic process
Transcript
Level		FPKM:16.22 TPM:8.44
ORF EntryO_BomoMSG10659_complete:A_BomoMSG_c22820_g1_i1
Sequence
(Nucleotide)
GATTGACAGAATTGACATCAAAATTAGCAAACTTTCGAAATTTCGCTAAAATTATAAATT
TTACTTTATTTTATGAATAAAATTGAATAAATACTATCAATTAAAATGTCTAGTAATACA
AACCCTTTAGCTGGGACGGCGCATCTTCTCGACGAATTAGACAAGAAACTAATGGTGTTG
CTGCGTGACGGAAGGACGCTTATCGGGTATTTACGCTGCGTGGATCAATTCGCTAATCTA
GTGCTCCACAAGACAATAGAACGAATACACGTTGGCAAAGAATACGGTGATATTCCGAGA
GGCATTTTCATTGTTAGAGGAGAGAATGTTGTTCTACTTGGTGAAATAGACAAAGACAAA
GAAGAAAATCTCCCTCTAACGGAAGTATCAGTAGATGAAATACTAGATGCTCAAAGAAGA
GAACAAGATGCGAAGATTGATCAACAAAAATTGTTATCAAAAGCTTTAAAAGAAAGAGGG
CTTAATTTACTAGCAGATCTTGGACACGATGATATGTTTTAAGTTTTCGGAAATATATTA
AAATTTATATTTGTTAAAAG
(560 bp)

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