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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22805_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_TRIP12_isoform_X3_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
Transcript
Level		FPKM:5.66 TPM:2.94
ORF EntryO_BomoMSG10620_complete:A_BomoMSG_c22805_g1_i1
Sequence
(Nucleotide)
CGGCGACGCTGGCCGAGGAGTCGTCGTCCGAGGAGGGCGAGGTGGGCCGGCTGCAGGCGC
TGCTAGAGGCGCGCGGCCTCCCGCCGCACCTGCTCGGCGCGCTCGGGCCTCGCATGCAGC
ACCTCCTGCACCGGACAGTCACCGCTAACTCGGCGGCTTCTAAAGCAGCTCAACTGCTCG
CTGGCCTCCAGGCAACCGGCGACGAAGGCCAACAGCTTCAAGCCGTCATAGAAATGTGCC
AACTTCTCGTTATGGGCAACGAGGACACGCTCGCCGGCTTCCCGGTCCGACAAGTCGTTC
CCGCTCTCGTTAACCTGCTCGCTGCCGAACATAACTTTGACATGATGAACCACGCGTGCC
GCGCGCTGACGTACATGCTGGAGGCGCTGCCCCGCAGCAGCGGCGCCGTGGCGCTGGCCG
TGCCCGCCTTCCTCGACAAGCTGCAGGCCATCACGTGCATGGACGTCGCCGAGCAGAGCC
TCACCGCGCTCGACATGCTGTCCCGCAGACACGCCAAAGCCATCCTGCAAGCGCGAGGTG
TATCGGCCTGCCTGACCTACCTGGACTTCTTCTCCATAAACGCGCAACGTGCCGCGCTCT
CCATCACCGCTAATTGTTGCCAAAACCTCACTGCAGATGAATTTCACCTTGTCCGAGAAT
CTCTACAATTGCTTGCTAATAGACTAACTCAACAAGACAAAAAGTCAGTGGAGTGCGTTT
GTCTCGCATTCTCGCGGCTCGTGGACAGCTTCCAGCACGACCCGGCACGCTTGCAGGAAA
TCGCCACTCCGGAATTACTTACTAATCTACAACAACTTTTGGTGGTGCAGCCGCCACTGA
TATCGGGCGGGACGTTCATCATGGTGCTGCGGCTGCTGTGGCTCATGTGCGGCGCCTGCC
CGCAGCTCGCGCTCGCGCTGCACCAGCGGTCCATCGCCGACACGCTGCTCTGTCTGCTCA
CCGGCTCCACGCTACATCAGGAGCAAGTGGAGCTGATACCGCGCCTGCCGCAAGAGCTGT
ATGAGATCACATGCCTCATCGGAGAGTTGATGCCGCGGCTACCCACCGACGGGATCTTCG
CGGTGGACGCACATCTCGACCGGCCCTGGTCCACCAGCACCGAGCGAACTGCGCATTGGC
AGTGGCGAGACGATAGAGGTGTATGGCGTTCGTACTCATGGGCAGAAAGCCGTGCTCTGG
AAGCAGGTGCGGCGGCGGGCGAGGAGGAGGTGTGCCTGAGCACGCTGGGCCGCTCCTACA
CGGTGGACCTCACCGCCATGCAGCAGCTCAACGAACATACCGGCACCGCGCGGCCCGTGC
AGCGCCTCGCCCCCCCGCACGCACCCCACGCCGCCG
(1356 bp)

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