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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22797_g1_i3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		spatacsin_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007409 P axonogenesis
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048167 P regulation of synaptic plasticity
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:4.08 TPM:2.12
ORF EntryO_BomoMSG10611_5prime_partial:A_BomoMSG_c22797_g1_i3
Sequence
(Nucleotide)
TTACACTCCATAGCGACCGGACAGAAAGATAGAAACGTCTCGAACAACGTTGGGAGCTCG
AACTCAGAGAGACCCTTCTCGATGACGTTGAACGAGATCGAAGTCGAATCGGATGTCGGT
AATATCGAGAAAACGGTCCTACTCGAGGAGCCCGAAGCGATTGACGGTTGGCGGAAGGTG
ATCTTCCAGCTTTTGGAGCTCAGACTCATCGTCGACGCATTCCGTTTGTCTACGCTGTTC
AAAACGCAGCCGGAGTTCAGGTACCGGCCGCCGCCGTGCCCCGTCCAAATCCTGAGATCC
AGCCTGAAGCTGGCCGAAGGAACGTGCTCGCCTTACGAGCCACCCCAAGAATTGAGATTA
GTGATATCGTCTCCGGTTTTGCAAAACAAACTGTCAATTTCAGGCGTGTCCGACGCGAGT
TTTGAAGAGCTGGTAGTCATACAAGAGAAACAAATGAATGCTCCAGACAGCTCGCACCTC
GCGGCTCGCGAAGAGGCCGACCGGCTGTCCGCGTTGGACGCCCTTGCCGTGCGAAGCGGC
TTGTCTCTAGCCAAACAGGTGGCCAGCTACTTCCGGATAGCTTTGCAAATCGGCTGGGAC
TATTCGTCGGTGTTGAAGTATCAGAATCGAGCCCTCGATTTTATAAATTTCGTGAGCGGC
CGAGCGCGGCTGTCGTTGGCGAACCTCGTTTTTAGAACATTCAACATCCCCACTAAACAG
GTAGCAGAATACCTTTGCCGGGAGATGGTAGCAGCGATCATATCGCCGCATCTGGTCAAG
ACGTCAACCTTCAGACAAAAGGAGCACTTTCAATACACACTATGGGGCTACGCGATCAAC
TCCGACATCGAGATGTTCCTAAACATGAGGCCGGACGCTTGTAGCCAAATAGGCAGGCTG
ATACTCGATCACCTAATGGCCTTCCAGAAGATATACAAAGCGACGACCGTATCGAGAGTT
CCAGAGAACGCTCTAGACGATAGTTGTCTTGACGTCGAGACTTTGATAGATGAAGAATAT
CAGCACGTTGAGGGAGAGGAAGCGGGTTCGGTATTAACGGGCGAAGGTACCTTACTGTCT
GCGGAAACTGAGTCCGTGTATTCCGTGTCGACGGTCTACAGCGCTGGTAACAAGCTGACC
CGCGACTCCCGGAGGAATTTATTCGATGTTATAACAAGGAATAACGTGCACGTCCGATAC
GAGGTCAAATCGAACGTTAGGAAGATAACGAAGGGTGCCAAATTGTCATCGAAACAGGTG
AACATAATAGCGATAGAGTTGCTGGTGATGGCGCACGAGTGCTTCTCTTGCGCGTGCGAC
ACGGAGGGCGTGGCGGTGACGGTGCGGTCGGCGCAGGCTCTGACGTCACGGCTGCTGGCG
GCCCGCTCGTGGCGCCTCATGGTGCGTCTGCTGACCGGCCTCGCGCGCTACACAGAGTGC
GCTTATATATTCCAGGCGCTAAGAGACAATCACCAATTCGAATATCTTCTCGGTCAATTC
GATTATATGTTAGGGCAGCAACCCGATAAAATAGCGGAGTTCAAACAAGGCCTGCTCGAT
TTCCTGAAGAACCATTGTCCGGGCGATACCGACACGTACATAATGGTCGCCCTACACTTC
AACATGTACGCCGAGGCGGCCGGCGTCAAGAAGAAACAGGCATTGAACTTGATTGAGGAT
TTAGAAAAAATGGCTTTGGATGCCGCCAGGTTGGTATCGAAGAAGCCCTTCCAACCGCCG
ACCTGGTTGTTGATTCACGACAACACCTCGACGAGGCTGCTCCTCGAGACCGCGCTGAAC
CATTGCACGGACGCGGCGGAGCTGTACCTCCAGGGCGGATGTACTGGATTCGCTGGCGAA
ATGGCGGCTCTGGCGCAGCAGATCGCCCTACAAATATCCTTACTAAACGCTTCTCCTACA
CGACTTATATTGAATCGAACTACGGAAAAAACGTATAGACTTGTCAGCGAATATCTGAGT
TTCATGGAGGGTTTAGTGCTGCTTTCGGGACGCAGCGGGGAGGCGTGGCGCGAACTCGCC
TACAGACGCGCGCTCTGCAACGACCAGGCTTACCTCCGGGACATGGTCACCTACAGGCCC
GACGTGGCGCACGACATGCTCAGCAGATATAAAACAGAGAGAAACAAGACTTCCGTATCG
CAGGCAGCTATGACTGAACTCCGTAATCTGTGTAGATGATATAAAATAAATATTTGAGTT
ACTCACTCACAAAAATACTATATTCAACAAAGTATTGAAAAAAAACATTGCATATTTAAT
CTTAAGCTATAATATTGCATGCTTATAATATAATCGAAACATTATTAATCAAATAAGATG
GGACTGTTGCAAATGGCGTGGGACATGACAAGGACAAAGAAGATATTATTATAATCGAAA
TAATGTAACCATTTATTATTGTTGATATTATAAAAATAATCGCCTGTGAGATTTATCGAG
TG
(2462 bp)

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