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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22796_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
Ontology
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
Transcript
Level		FPKM:16.75 TPM:8.71
ORF EntryO_BomoMSG10609_complete:A_BomoMSG_c22796_g1_i1
Sequence
(Nucleotide)
GTGTTATGTCGTGGAGTCGTGATTATTTGTACTTTGCGGCTTAAAAACGTTGCTTATTAG
TTGCAGTTTATGTTTAAATATTTTTCACAATGTCTAATATATCATTGGACAAAGAGACGT
TTTATCGTCGCATGAAAAAGCTGTATGCGACCTGGAAGGCTGTAGCTTCAGATCCTAAGA
GTGATGATGCCCTGTCAAAGGTGGATTGCTTAGTGTCGTGTGTAGGAGTAGATGAAGAGA
CACTCTACAGCAAATCAACATCACTTCAGACATGGCTGTTTGGATATGAGTTACCTGACA
CAATCACTGTCTTAACAGAGCATAGCATGTGTTTTTTAGCCAGTAAGAAGAAGATTGAAT
TCCTGAGACAAATAGAAAATGGTAAAGATGAAACTGAATTGCCCCCAGCAAAACTTCTTA
TTAGAGACAGAAATGACAAAGACAAGGAAAACTTCAACAAACTTCTCCAAGAAATAAAGA
AATCAAAATCAGGCAAGACACTGGGTATTTTCGTGAAAGACAATTATCCAGGTGAATTTT
GTGAAAGTTGGAAAGCAGTTCTGAAGGGAGAGAAGTTTGAAAATGTCGATGTCAGTTCAG
CGATTGCATTATTAATGGCGCCAAAAGAAGACTCTGAAATTATTACAATAAAAAAAGCAT
GTCTGGTCACAGTGGATGTCTTCACAAAATACTTAAAAGATCAGATAATGGAAATTATTG
ATTCAGATAAGAAAGTCAAACATTCAAAACTTGCTGAAGGTGTGGAAACAGCAGTTTCAG
ATAAGAAATATGTAACAGGAGTCGATACAAGTCAAGTTGACATGTGTTATCCTCCTATTA
TACAGTCAGGCGGACACTATAGTTTGAAATTCAGTGCAGTATCTGATAAAAACCACTTAC
ACTTTGGCGCCATAGTATGTTCACTAGGTGCTAGATACAAATCATATTGTTCGAACATAG
TCCGTACATTACTGGTCAACCCAACTGATGAAGTACAAAGTAATTACAATTTCTTGTTAA
ATATTGAAGAAGAGGTGATGAAGAGTCTTGTAGCTGGAGCGAAATTATCTACAGTTTATG
AAGCTGGTCTAGCGTTAGCCAAGAAAGAGAAACCTAACTTAGTTGAAAATCTCACTAAGA
GTTTTGGATTCGCTATGGGTATAGAATTTCGTGAAAGTTCCATTATTATTGGACCTAAAA
CAAATGTTACCGCGAAAAAAGGAATGGTCTTCAACATAAACATTGGCTTGGCGAACTTAA
CAAACAGTAATGCCTCAGATAAGGAGGGGAAGACATACGCGCTCTTCATTGGTGACACAG
TATTAGTTAACGAAGAGCAGCCAGCGTCTCTACTAACACAGTCTAAGAAAAAAGTAAAAA
ATATAGGAATATTCTTGAAAGATGACGATGAAGAAGAAGAAGAGGAGAAAGAAAACAAGA
CTGAAATACTCGGTAGAGGCAAAAGGACTGCAGTGATTGAATCGAAATTGAGAACAGAGC
ATTCATCTGAGGAAAAACGTAAGGAGCATCAGCGTGAACTTGCTATATCTTTGAATGAAA
AGGCCAAAGAAAGATTAGCCAAACAGTCGACCGGTAAAGATACAGAAAAACTAAGGAAAA
GCACAGTTTCATACAAGAGTATTAGTCAGATGCCACGTGAGAATGAAGTTAAAGAATTAA
AATTATATGTCGATCGTAAATACGAAACAGTAATCCTGCCAATATTCGGTGTCCCAGTAC
CATTCCATATATCTACAATTAAGAACATCTCGCAGTCAGTGGAAGGCGATTACACGTACC
TTAGAATTAACTTTTTCCATCCCGGCGCCACTATGGGCAGGAATGAAGGCGGGAATTACT
CTCAACCGGACGCCACCTTCGTTAAGGAAGTTACATACCGAAGTACAAACACAAAAGAAC
CGGGTGAGATATCGCCGCCTTCGTCAAACTTGAACACTGGATTTAGACTTATTAAAGAAG
TACAGAAAAAATTCAAAACCAGAGAAGCAGAAGAACGTGAAAAGGAAGATTTGGTCAAAC
AGGACACGTTAATATTATCACAGAACAAAGGAAATCCTAAGTTAAAAGATTTGTACATAC
GTCCCAATATTGTTACGAAGAGAATGAGTGGTTCATTAGAAGCTCACACAAACGGCTTTA
GATTCACATCGGTACGAGGCGATAAAGTGGACATTTTGTACAATAATATAAAGAATGCAT
TCTTTCAACCTTGTGATGGAGAAATGATTATACTTTTACATTTCCATTTGAAACATGCCA
TTATGTTTGGTAAAAAAAAGCATGTGGACGTGCAATTTTACACCGAAGTCGGTGAGATAA
CCACAGACTTAGGAAAGCATCAACACATGCACGACCGCGACGACCTCGCCGCCGAGCAGA
GCGAACGGGAGCTGAGACACAAACTGAAGGTGGCCTTCAAGAGCTTCTGTGAACGAGTCG
AGAACATGACCAAGCAAGAAGTCGAGTTCGATACACCTTTCAGAGAGCTTGGTTTCCCTG
GAGCTCCATATCGGAGTACAGTTTTACTGCAGCCTACCTCCGGAGCCCTTGTCAATCTTA
CTGAATGGCCACCATTCGTGATTGCATTAGAAGATGTAGAGCTCGTCCACTTTGAGAGAG
TACAATTTCACCTCAAAAATTTCGATATGGTCTTCGTATTTAAGGACTACGCCAAGAAAG
TGGCCATGGTTAATGCCGTGCCTATGGACATGCTGGATCATGTCAAAGAATGGTTGAATT
CTTGTGATATCCGGTACTCGGAGGGTATACAATCGTTGAACTGGACCAAAGTTATGAAAA
CTATAACAGATGACATTGAGGGCTTCTTCGAAAATGGTGGCTGGTCATTTTTGGATCCAG
AATCTGATGGTGAAAATGAACAAGAGGAGGAAGATAGTGAAGATGAAGATGAAGCGTACG
AGCCTACGGACGCTGAGTCTGATGAATCTGAAGGGTCTGACTATGATTCTGAGGCGTCTG
ATGAATCTGACGCTTCGGGTGATAGTGAAGAGGAAGACGAAGAATCCGGTAAAGACTGGT
CAGATTTAGAGCGGGAAGCTGCCGAAGAGGATAAAAAAGACCGCAACTTCGATCGAGATG
ACTTCGACCGGAAACGTAAAGGACGAAACCAACAACGCTCGTACGACTCTGATGAGGGAG
CCGCCAAGAAAAGCAAACATGACAAGTCTAATCATAAAAGTTCTAGTTCAAACCACAAAA
GCTCTAGTTCCAATCATAAAAGTTCGAGCTCAAACCATAAGAGCTCCAGTCATAAAAGCC
CTTCAAAGAACAGTAGCAGCCCTTCCAAGAACCGGGATAAGCACCACAAATCATCCCACC
ATGATCGACACCACAAGAGTGACCATAAGTCCTCTAGTAAAGACAAAGACAAGAAACATT
CTAGTGACCATAAATCACACAAACGGTCACGCGATGACAGCAGAGAACACGGCAACAGCG
CAAAGAAAGCGAAAAAATAAAAAAGCAAACGTTTTGATACAAAGGATTCAAACGGGTTTC
ATTCGCCACAGCGGCTTGTTAATAATAATTACGTATGTGATTGTGTCGTCTCATAATTTG
TCCGTCTAATGTTAAAAAACAGGTCTGAGTGTTTTGTATGTATGTTGTTAATAAATTTTC
AGTTGAGAATGTGACACGATAATAGTTAAGTAAATTTAAATAAATAAAGAACCTGTGCCC
CACTTACACAGCACACGATATTGTT
(3745 bp)

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