SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22759_g2_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		gamma-1-syntrophin_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007154 P cell communication
GO:0008022 F protein C-terminus binding
GO:0016013 C syntrophin complex
GO:0032587 C ruffle membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:3.43 TPM:1.79
ORF EntryO_BomoMSG10557_complete:A_BomoMSG_c22759_g2_i2
Sequence
(Nucleotide)
GCTACAGGGTCGGTGAGAGGCTCCCGGCCTCCCTCGGTGGCTTCGGATAGACACGATGTC
ACCATTAAGGAATGGGTCGACGTCGTATCAGTGCCATTAATGATGGGATACGTAACGCGA
TACGTCCTTGGAACGGATAAATTGAGACCTGGAGCTTTTGAGGTCCGAGGAGCTCGTCCG
CATTTAACCACCGGAGTGATACACGTGGACGATCCCGTGGCGCTTTCTCACTGGCTGAAG
AGCATTTCCGATAATATCGTGGGACTCACGAACTTACAGATGAAACTTTTTAACCGCCAC
CTGGCGGCTGGAGAGCGGATCGAGTACATGGGTTGGGTGCACGAGGGCGTGGTCACGGCC
CCGCAGCCCTGGCAGTCCTATAGACCGAAGTTCTTGGTACTGAAAGGAACTGACGTCATG
CTTTTTGACGTACCACCGATGAACATGACCGAGCTAGCGAAATGCCCAGAAAGCCTGAAA
GTTTACCAGACCATGTTCAGGACTGTAAAAGAGAGCGAGACGGTGGACTGGAGGCAGCAC
TGCTTCTTGGTGCAGAGCAGCAGCGCCGGGGTCGGGACCCCAGGGCCGAGGTACTTCAGC
GCGGAGACCAGACAGGAACTGCTGAGGGTCGAGGCCGCCTGGACAGCTAACATCGTCAAC
TCTGTTATAAGACTCGGGAAAAAGACATTCACGGTTGTGCATTCAGGACGTGCGGCCGGG
CTTACGTTGGATTGGTCGGCGGGGTTCTCGCTCACCGAGGGCACACCCGGAGCGTCTCCC
GTCTGGTCGTATAGGTTTTCGCAGTTAAGAGGTTCGAGTGACGATGGAAAATCGAAATTG
AAACTCCACTTCCAAGACGCCGAAACGAAGGTCATTGAAACAAAAGAATTAGAATGTCAA
ATACTGCAGAGTCTATTGTTCTGCATGCACGCCTTCCTGACCGCAAAGGTGGCCTCCGTA
GACCCGGCCTTCCTCGCGTCCATACAGCAGTCTAATTAAATATTAAACCCAAACGACTGT
AAACATTCCCTTATGAAACATACATTATTAGTGTGGACAAGTGTGAAAATCTCACTGACT
ACGCAAAATTATGTTTGTTGTTTTTATCCGGCAAGATACCATCGACTGACGATAGATGGC
GCTAGGGCATTTTAAATAATTAAGTATTTCGGAATTATTTTGTTAGTAATGAAAACTAGG
ATGTCAAGAGACACGTGTTAACGAAAACTAGGATCTGAAGAGAAGCGCTAACGATAGGAA
ATATTGGTGAAGCGAAATGTACGTGCTAACTCTCTGATTGTCAATTTAATAGCGAAAACT
AGTTGACAACGAATTAATTGACGTCTTTTAAACACGATCGGTGATTTTAAAATGAGAAGA
ACTTATATGTTTAATGTTGTTGAAAATGGAAC
(1412 bp)

- SilkBase 1999-2023 -