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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22747_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_TRAIP_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0032688 P negative regulation of interferon-beta production
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:4.49 TPM:2.33
ORF EntryO_BomoMSG10534_5prime_partial:A_BomoMSG_c22747_g1_i1
Sequence
(Nucleotide)
CAGCGACCTAATAAATCAATCTGAAAGTATATATGTGACAAAATGCGGTCACATATTTCA
TCATCACTGCCTTATACAGTGGATTGAAAGGTCAAAATCCTGCCCGCAATGCCGCAACAA
AGTCACAGAGAAATGCATGTTCCGAATGTATCCTACAATATCAAATGATGTGACAAGCGG
CGAAGACTCAGCTACTTTACAGTCTAGATTGGATGACACACAATTACAGCTCAGGCAACA
AAAATCTGTGTGCAGAGATAAAGAGGACAAAATATCTGATTTAATAGGGGAGCTAAAAAA
GAATGAAGCTCTATTAAAATCATATGAAAAGAAGTTGGTAAGCAGAGATTCTGCAATGAC
TGCTATGAGAGAACAAATGGAGTACCTCAAAATTCAAAACAAAGAGACAGTCAAGTTAAA
AGAGGAAAATGAAACAATGAAGCAGAATTTACAATTGTTAAATGGTTTAAATAACATATT
AAATGCAACATGTGAAGACGTAGAGAAGATGCTCCAAGGATACACAGATGTTAAAACCGT
TGCTATATTTGCTACAGCGCTTAAAAGAGGTCTCTGCGAGTCGGAAGCCAAGAAGCGCGA
GTCGCGCGACAAGCTCCACGCAGCCAAGCAGCAGATCGCAGCCGAGAAGCTCAACGTAAG
GGACTTGCAGGCCAAGTTGCTCCATGCAGAAGATAAACTGACGGACATGGAAAGGAAATA
TCAAGCACTGGCCAAAAGGAAAGCCGGAGATATGACCGAGAAATGTATTGATGACAAGCC
GGCTCACGCGGAGGCGCACTCTCTCAAGCACATGCGGCCGAGCTTGGAGAACGTTGAATC
TTTAAATACCACTAATAATACCAGCATTAGGACGTTAGTGGACCGTATAGAAAATGCAGA
TTCGCCGTATCTAAGTCTGAAACAAAGCAATCTGGCTCTAACTGCGTTGCAGAGGGCGCC
GAAACATGCCCTATCCCTAGACAGGATCAAGCCATCGGAGTTAGCTATAATAAACTCAGC
CAGAAGCACTGTCTCGAAGAAGCCATTAGACAATAAATCATTAAGCATATTTGCCAAAAA
AGAG
(1084 bp)

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