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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22710_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
Ontology
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.12 TPM:2.14
ORF EntryO_BomoMSG10477_complete:A_BomoMSG_c22710_g1_i2
Sequence
(Nucleotide)
GCCGCCGACCTCAACGCGCGCAACCGCCGCCGCCAGACGCCGCTGCACATCGCCGTCAAC
AAGGGACACCTCGGCGTCGTGCGCACGCTGCTGCAGCTCGCCGTGCACCCCGCCCTGCAG
GACTCTGAAGGCGATACACCCCTGCATGATGCCATTTCAAAAAAGCGTGACGACATGCTA
ACGCTGCTACTAGAACATGGAGCCGATATGACCCTAACAAACAATAATGGTTTCAACGCT
CTGCATCACGCGGCGCTCCGCGGCAATCCAAGTGCAATGAAGATAATGCTGGGTAAGCTT
CCGAGATCGTGGATAGTAGACGACGCCAAGGACGATGGCTACACAGCTTTGCATCTGGCT
GCCCTGAACAACCACGCCGAGGTCGCGGAGCTACTGGTGCGCGCAGGAGCCCGTCCTGAC
CTACAAAACGCAAATTTACAGACAGCTCTTCACTTGGCTGTAGAGCGTCAACACACTCAA
ATAGTTCGGCTACTAGTAGCTCATGGAGCCAATCTTAATATTTGTGACAAGGATGGTGAC
ACACCGTTACATGAAGCGCTCCGGCATCATACCCTGCAGCAGCTCCGTCGTCTACAAGAT
GCACGAGACTCTGCACTGCTCACAGGCCTCTCACATGCTCATGACAAAAAGTCGTCTGCG
TCGATAGCTTGTTTCCTCGCGGCTCACGGTGCCGATCTAACCGTCAAGAATAAAAAAGGT
CAAACACCTCTTGACCTCTGTCCGGACCCCAATCTCTGCAAGACGTTGACTTCGTGCCGC
AAAGCTGGCGCGTCGGCCACCGACAGTACTCCAGAGAGTGAGCCAGGCTCCTCCGCTATC
AGCACATCGGCGCCCGCTGCGGACTCTATATCGGCAGGAGACACGCAGCCGCAGTCAGAC
CCCACAGCCGATGAATGTCTCGTATGCTCCGATGCTAAGAGAGACACTCTGTTCCGTCCT
TGCGGACATATCTGTTGCTGCAATGCTTGCGCCGCCAGGGTGAAGAAGTGTCTGGTGTGC
CGCGCCGGCGTGTCGTCACGCGAGCGCGTGCCTGAATGCAGAGTGTGCTCGGAGGCGCCA
GCCACGGTGCTGTTCCGTCCGTGCGGCGACGTGTGTGCGTGTGCGGCCTGCGCTCCGCTC
ATGCGAAAGTGCGTGGAGTGTCGCACGCCGCTACAGTCTGCACAACCCGCACAACCGGTC
CCGCATCCCGTCACGCAACCCATCGCGCAACCCGCCGCGCAGCCTACCCCGCAGCCCGCC
CTGCACCACAACAACAACAACAACAACGCTCTCAACATCGATCTTGAAAAGGACAGCAGT
AGTAATTTAGCTCAGGTGCAAGTGAATAAAGGGCAGCCCGCGGCGACGCCGGCCGCGCCG
CACTTCATGAACAACGGCT
(1399 bp)

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