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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22622_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		threonylcarbamoyladenosine_tRNA_methylthiotransferase_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0035598 F N6-threonylcarbomyladenosine methylthiotransferase activity
GO:0035600 P tRNA methylthiolation
GO:0043412 P macromolecule modification
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0061712 F tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
Transcript
Level		FPKM:16.79 TPM:8.73
ORF EntryO_BomoMSG10347_internal:A_BomoMSG_c22622_g1_i1
Sequence
(Nucleotide)
CAAAATTTGAGGATGCCAGGTGTTTGTGATGAAATTATAGACGACATAGAAGATTTGATA
TCTTCCCAGGATATAACTCCTAAAGAACGTTATGCTAGTAGGAAGAATGTAAGCGTCCGA
TCTAAAAAGAGGGAGAAAAAAGACCCCGAACAGATTGAAAAGGTTATATTAGAGAGTGTT
GTACCAGGCACTCAAACAATATATGTAAAAACATGGGGCTGTGCTCATAACAACTCAGAT
TCAGAGTACATGGCCGGACTGCTGGCTGCTAATGGCTACAAATTGACAGAAGACAAATGG
GATGCGCAACTTTGGTTGTTGAATTCATGTACTGTAAAGAGCCCGGCTGAGGATCATTTC
AAGAATGAAATTGAGCTTGGTCAGAGTCGTGGCATACATGTTGTTGTAGCAGGCTGTGTA
CCGCAGGGCGCACCAAAAAGTGGCTACCTACATGGACTCAGTATAGTTGGTGTACAACAG
ATTGACAGAATTGTGGAGGTCGTGGAGGAGACTTTGAAAGGTCACACAGTCCGTCTGTTT
GGTCAGAGGAAAACAAACGGTCGTAAAGCGGGTGGGGCTTCACTGCTCCTGCCCAAAGTG
CGCAAAAATCCTTTAGTCGAGATCATAGCCGTGAACACGGGCTGCCTGAACCAGTGCACA
TACTGCAAGACCAAGCACGCCAGAGGAGAGCTGGGCAGCTACCCTCCGGAAGAGATCGTG
GAGAGAGCACGACAGTCGTTCACCGAGGGAGTTGTGGAGATATGGCTTACAAGCGAGGAT
ACAGGAACCTACGGTCGTGACATAGGAACATCTCTGCCTGCCCTGCTCGATGCGCTAGTA
TCAGTGATACCGGACGGCACGAGGCTCCGTCTGGGCATGACCAACCCTCCCTACATCCTG
GAACACCTGCCCGCTGTCGCGAGGATCATGAGGCACCCCAGGGTCTACAAGTTTCTCCAC
GTCCCTGTGCAGTCGGCCAGTGACCAGGTACTGTCCGACATGAAGAGGGAATACACGCGA
GCCGACTTCGAACACGTGGTCGACTATCTCAGGAAAGAAGTCCCCGGCATCACGATAGCC
ACAGACATCATCTGCGGCTTCCCCACTGAGACCGAAGCTGACTTCGAGGAGACCATGCAG
CTCTGCAGAAAGTACAAGTTCCCTTCGTTGTTCATCAACCAGTTCTTCCCGAGACCCGGG
ACGCCGGCTGCCAAGATGACCAGGGTACCTGGTCAAGAAGTAAAGAAACGCACAAAATTA
CTGTCGGACTTCTTCAGGTCGTACGAACCTTACGGTCACAAGGTGGGGGAGACGCAGGAG
GTGCTAGTGACCGACGTGTCGCACGACAAGAACTACTTTGTCGGCCACAACGAGTTCTAC
GAGCAAGTACTGATACCTAAGGAGGAGAAGTACATGGGGAAATTAGTTACAGTAAAGATT
ACGAGCGCCAGTAAATTCTCTATGATGGGTCAGCCCATAGACAAACCTAAGATGGCGGGC
TTGACGGTGCAGATCGGAAGA
(1521 bp)

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