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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22499_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		RNA-binding_protein_cabeza_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0035327 C euchromatin
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:28.23 TPM:14.69
ORF EntryO_BomoMSG10162_complete:A_BomoMSG_c22499_g1_i1
Sequence
(Nucleotide)
CTTCCTTTTGTCGATGGTGTGCGTGGCGTTACTTTTCTATTAATTTCGCGATAATAATTA
TTGCGACAGTATACACGAGAATCATAGTAATTAGTGCTTAATCCGGCAAGAATATGGGTG
ATCGTGAATATAGTGGCGGTGGATACGCGTCGCAGTATTCGGTGCCTCCACCGGCATCAG
CCGATAACAATAGTTATGGCGGTGGGCAAGGTGGCTATAACCAAGGCGGATACTCTGGGC
AATCTCAAAATCAAGAATGGAACCAACAAAGTTCAGGTGGTAATTCCTATGGAGGAAGTA
ATCAACAAAGTAGTAACTATGGTCAGAGCTATGGAAGTGGTTATGATAGTGGCGGTGGCT
ATGAAAGAAGTAATGATGGGTATAATTCGAGTGGAGGAGAGCGTGGCGGGAGCAATTATG
GAGGCAGTGATCGTGGTGGTTCTGGCTATGGCGGTGACAGAGGCGGCAGCGGCTATTCTG
GAGGTGGAGACCGTGGCGGGTATGGTGGAGGTGATCGTTCAAACAACTTCAGTAGAGATG
GGGGAAATAGAGACGGTGGATATGGTGGCGGAGGCAGGGGGGGTGGTTTTAACAAAGGAG
GCGGCGGAAGCGGTGGATATGCCGACCGTGGTGGCGGTGGTGGTGGTGGCGGTGATATGG
TAACTCAAGAAGATACTGTCTTCGTTCAGGGAATGAATCCATCTACTACTGAAGAGGAGC
TGTGCCAACATTTTGGAGCTATTGGTATAATCAAGACTGATAAAAAAACACAACGGCCGA
AAGTATGGATGTACAAAGACAAATCTACTGGCCAACCTAAAGGAGAAGCGACTGTAACTT
ACGAAGATTCCAATGCAGCTTCTTCTGCAATTCAATGGTTCGACGGCAAAGACTTTAATG
GAGCAACTATTAAAGTTTCACTTGCCCAACGACAAAATACTTGGGGAGGTGGCAAAGGAG
GCGGTGGTGGCTTCAGAGGAGGACGAGGTGGAGGCGGCGGGGGAGGAGGTCGCGGTGGTG
GTGGAGGCAGAGGGGGTGGATCTCAAGGTTCTAACAACCGTGATGGAGACTGGAGATGTC
CAAACCCCAATTGTGGAAACACCAACTTTTCTTGGAGGAAGAATTGTAATAGATGTAATG
AAGAGAAACCCGGCGGCGGTGGCGGTGGAGGTGCTCCAGGCGGAGGGCGAGGCGGCGGTC
CTCCAAGCCGTGGAGGCCGTGGCGGCGGTGGCGGGAGAGGTGGAGGAGGAGGAGGTGGCT
GGGGTGGCCGCGGGAGTGATCGAGGAGGTGGTGGACGCGGCGGTAGCAGAGACGGTGATC
GTCGCAGTTATGGAAGCAGTGGCGGTGGTGGAGGAAGGGACGGTGACCGCGGTAATGGTG
GGGGCGCTATGAGAGGAGACGGCGGCAGAGACCGACAACGACCTTACTAAATATAATTTT
AAGATTTAATCATAATGTTAATACTTCCTTCTGACTGAGATCTAAGTTTGTAAAAACGTT
CAATCTAAACTTTCCATCATATTACAGTGTATATAAGATATCTTGAACACTTTAGATGCA
TTTCAGACATGTATGCTTCTTACTGAATTAGAATTTACTTGAATTAAAAATGTAATCTTT
CATTAATAACTAGAAATACTAACAATTGATGCTTTTCACCCATTTTTTAAATTAACTATT
GTACAATAGATTTTTTTTTAGTTTTTAGTGTGCTAAATATAAAATCTATATATTTATAGA
GATCGAGATTTATTTCTAATGTTGTCAATAACATGTCTCGCTTATCAAAGCAAAGGGAAT
CAAAGTGATAGCCTCGTTATGATTGGTTAAAATATTGTACAAGTGTGTAGAGAATTAAAA
TTAAAAAAATTAGAATGGAGATTTCTTAATATTCATTTATTAATAGGTGTAAAAACAAAA
TTATAAAATTTTTAGGTTTTTTGTTTTTTTTTTATTAATTGCAGAAACAGTAATTTTATG
TGTAAGTGAAATGTACTTTTAGTAGTATTCCTGCTGCAAGTTAAGGTTTTTTCAGTTACA
TATTATTTTGGTCAGATATCTAGGATTTTTAATAAATAAACTTATTATATATATAGTACA
TGGACTCATTAACAACCCTGTCTCGGT
(2127 bp)

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