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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c22398_g1_i2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ubiquitin-protein_ligase_E3A_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0001541 P ovarian follicle development
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007420 P brain development
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0035037 P sperm entry
GO:0042752 P regulation of circadian rhythm
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051865 P protein autoubiquitination
GO:0060736 P prostate gland growth
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:2000058 P regulation of ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:18.96 TPM:9.86
ORF EntryO_BomoMSG10032_complete:A_BomoMSG_c22398_g1_i2
Sequence
(Nucleotide)
TGTAATTTTGTACATAGGTACCTACATAAAACACAATAATAGCCAATAGGTAAAATTATA
TGTTGTACTATGTAAATGTTGTTTGTTTAGTCCAAGAGGTGAACACAAAAAATATTTCTA
AAATTTGTACCCTGCTAATGTTTACGTTATCACCGTATTTATGTAACTGGCCGTTTGAAA
TCACTACAGGATTATTAAGAATTTTCTATGAACCCGAAAAGCGAGTCTGTCGAAGCTTCG
AGGGGGAGCGAAGCATCATCATCATCGATAAATTCAACCCCTGACATTGTTGAAGACCAG
CTAACATCAGGAAATATTATGAAGCGAGCCGCAGCCAAGCAGTTAATTGAAAAATATTTT
TATCAACTGCTAGATGGTTGTGGCAATGTTAACTGTGATAACAGATATTGTGCATCAAGT
GGGGCGGCACGAAATTTGTCCCCCAATGAAGCTGCCGCAGAAGCAATAAAGTTATTCTAC
AAAGAAGCTCGCCTCTGTAGTTCTGTAACACCCAATAAAGTGTCTCGGACTGATTCTAAT
TCATATGAGCCAAGCCCAAGTTCGACACTTGGGCCGAATCACAAAAACACATCAGAGAAT
AAAGAGAATCAAAATATCACAACACCGGAGCCAAGCACTGCGTCACGAGGGGAACCTCAT
ACTAGTCACACCGCACAGCAACAGAAACAAAAGAAAAGAAAACGCTATAACAATGGAGCA
CCACTGACGGAGGAACGAATCTACAAGCTGTGTGATGAGTGTCTGCAGAATCGAGCCGAG
GAGCCACTGTCGAAAGCATTGAGCAAAGCATTTTCACGACCCTCAATCCTCGCCAGATGT
TTTGCTAGTAAAATTAGTGAAAATGCCAATGAAACATCGAAAGATACAGAAAAAGAGTCC
AAAGAGTCTTCGAGATCCTGTGACCCCGACAAGGACATCGACAGCGTCGCGGCGCCGCAG
CTCGACGTCGCCTCGTGTCGCAGAGCCTTTCAGTATCTTGCCAAAGTTCCAACGGAATAC
TACAGTACAGATTTAGTGATCGCACTCAAGTCTTTGGGTTCATACTTATCTAAGGATTTA
AAATCTGAAAAATTGAGCATAGAGGATGCGGTTAACTGTTTCGTCATTACATTTGAACTG
CCAAATTTGGGGTGCAGCGATTATTTTGAGATTGCATTACCGGATGTGTGTCTGGCTATC
GGAGAACTACCCATCAAAGGTCAAGCAAGACTGGCCCGTATCTGGTCTCAATACTGCAAG
GATAGTTTACGTAACATATTGGAGACGCTACAGCAACTCATCAGTTTGAGGGTAGTTTCG
TGTAACTACCACGTGTTCTTCCACGTACAAGAAGACGGGCATGTGACTGGGCCTACAAGG
GTCTTAAAGGTCCTATACTACGCAAGCATATTAGCTGGAGTTTTAGATTCAAACACACTA
CATGAGGAACCGATTGTGATCGCACACCAGCACGACCCACTCGAGAGTGTATTAGGACAT
TTGTACCCGCCTTCCTCGATGAAGGGTGCGAGAAACTCACAACTCAACGACCCGTTAGCC
GTCGAACTAGGCGTTAGTGTGCTAGACTCGAGAACGCCGTACCTGCCGTTCGAAGACTTC
TACAACGAGCCGCTCAGTGACGTCATAGAAATGGATAAAGATTGCGAAGATTATGAGATG
GTAATTAGTAGGCCCAACACGAGGTTCTCGTTCCTGCGGCACCCGTTCGTGCTGACGGTG
GCCAGCAAGTCGCTGGGGCTGTACTACGAGAACCGGCTGCGCATGTACTCGGAGAGCCGC
GCCGCGCTGCTGCAGGCCGCCGTGGGCGCCGCGCGGCCCGAGCCCTTCCTGCGCCTGCGC
GTGCGCCGCTCGCACCTCATCGAGGACGCGCTCGTCGTGCTGGAAATGATATCAATGGAA
AGAGCTCTGGATCTGAAGAAGCAGTTAGTTGTTGAATTCGAAGGGGAACAGGGCGTCGAC
GAAGGAGGTGTCAGTAAGGAGTTTTTCCAACTAATTGTCGAAGAAATATTCAACCCGGAC
TATGGCATGTTCACGCACCAACAGGACTCTCGTAATGTATGGTTCAACCCCACATCATTT
GAAACGGAAGCACAGTTCACTTTGATTGGTATAGTGCTCGGTCTTGCCATATACAACAAT
GTTATTCTAGCAGTTAACTTCCCTATGGTTGTGTATAGAAAGCTGTTAGGCAGGAAAGGC
TCTTTCGAAGACTTAGTTGATTGGAATCCTATTTTATACAACGGCTTAAAAGATATGCTA
GAATACACGGGCGATGATCTAGAAGAGGTTTATTATCAGACATTCAGGATATGTTACCAA
GACGTGTTCGGAACTAATATGTTTCACGAATTGAAAGTGAACGGAGATAATATTTTTGTT
ACACAAGAAAACAAAAAGGAATTTGTAGATTTATATGCAGATTTTTTACTGAATGTATCT
GTAGAGACACAGTTCAGAGCGTTCCGACGTGGATTTTTGATGGTCACCGATGAGAGTCCA
CTCGGTGCATTCTTCAGGCCGGAAGAAGTTGAAATGCTTGTTTGTGGAAGCAAGGTTTTC
GATTTCCACGAGCTGGAAAAGTCGACAGAATACGATGGCGGCTACGCGTCCGACTCTAAA
ATCGTACAGGACTTTTGGGGCATCGTGCACAGCTTGCCGCTGGAGGACAAGCGGAAGCTG
CTTCAGTTCACGACCGGGTCGGACCGGGTGCCCGTGGGCGGGCTGTGCAACTTGAACTTT
GTGATCGCGAGGAACGGCCCGGACTGCGACCGGCTTCCCACCGCGCACACTTGCTTCAAT
GTCCTACTGCTACCCGAGTACGACACTAGAGACAAACTACAGGACAGACTCTTGAAAGCC
ATCAACTACTCGAAGGGATTCGGTTTGCATTGAAGCTATGCTATACGACGACGACGACGC
AACGCAACGCGGAACTAACTCAACAAAATTAGCATAATATTATAGTCGAGGAGTCGCAGA
TCGG
(3004 bp)

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