SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13969_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		BRISC_and_BRCA1-A_complex_member_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:5.60 TPM:2.92
ORF EntryO_BomoMSG3599_3prime_partial:A_BomoMSG_c13969_g1_i1
Sequence
(Nucleotide)
CAAACTTGAATTTCAAAAAACAATTTGTTTTTCAAATCATGTTTCAAAAAATTTTACTTT
ATTTTTAATTGGATTCTGTTTAATGTGTATGTATGTACATTTGTTTTTAAATGTATTTTA
TATCGCGGACAAGTGGCTTATCTATGATAATAAAAACCTGCTCTTATTTGGACATTTAAT
GTAAATTTCTAACAAAAAATCTTCAAATAGATATGTATAGAATTTTTCAATAATTCGAAC
ATAAAACTTAGTACCTATTGGGTTTAAACCGGAACTACAGCTTTGAGTGGTTACGCCAAT
AAATCTTATAATACATACATTTCAAATAATGGAAAGTCCTGAGACAGTATCTTCTAGTAA
CTCACATGGAGCATCAGACAGTGATTCAAGACAATATGAAGATACGTCTGTCCTCGAGAA
TGAAGATGTTAAGGAAATACAAGAACAAGTTCTTGCAAATCTAGAGAAGCCTAATCTGCC
AAATGTAAATGTACCAGAGAAAATAATTGTCTGCTTAGATGTTTGCTATGACAATCCAAA
TTCTCTATACCGTTTTGGTGATGGCACAACATTTTCTCCAATCAATATGTTGAAACGAAT
ACTTGATTTCTTTTTTCATACAAAACATGCAATCAGCAAGAAAACTGAATTTGCATTGAT
AACACTTCAAGATGCAGGTGCATGTTGGACCCAGAATTTTACAAGCAATGTTAAAGATTT
AATCAGTGCTATTGATTATGCACATGCTGAAGAAGCTACATCAGACACTTTTGATTTTGA
AAAAGTATATGAACTAATAAGACATCATATAGAAATTCCTATGATGAAACCTGGAGAATC
CTTACTGCCTCCTCCTTATATCGTCAGACTTCTGATTTTATATGGAAGATCTAATTGTGT
TCCAGTAATTCCTCATGAAGACAGATCGGA
(930 bp)

- SilkBase 1999-2023 -