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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13909_g1_i1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		zinc_finger_HIT_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0000182 F rDNA binding
GO:0000439 C transcription factor TFIIH core complex
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006364 P rRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0071480 P cellular response to gamma radiation
Transcript
Level		FPKM:15.30 TPM:7.96
ORF EntryO_BomoMSG3567_complete:A_BomoMSG_c13909_g1_i1
Sequence
(Nucleotide)
GTGTAATGAGCCTTCCACACTTACCCATAAATAATAGATATTAAGTGTATAGTCTATGAA
TAATAGTTTATAATAGTAATAGTATTCTGTATAACCTATGGTATCTACTGAAAGTAGGGA
GTAAATAGGTACCTACATACTTTATTTACAATTAATTATTACATAAAGTGACAAGTTCTA
AAACAATGAACCATGGTGAATGTAATGAAAGGTGTCCTCGTTGAATGTGATCCGGCAATG
AAACAATTCTTACTACACTTGGATGAAACTCTTGCACTTGGTAGAAAGTTTATTCTTCAA
GACCTGGATGAAACACACTTGTTCATATCAGCTGATATTGTGGAGACTCTACAAGCTCGC
GTTGACGATTTAATGGACCAGCTCAGCATACCCGTGCACGATAAAGGATTATAAATTACG
AGTTGCTACATCAAAATGACCTCACGCGAATCTGGAAGAGTCAAAGATGCCGAGAGAAGA
AAGGTTTTGGATGATGTGGCGAGAAAACGTCGAGCGAGAAAAGCAGTTGAGGCCCTAGAA
CAAGATAACTTTCATGAAGACCCACATGCAGATTTAGTTATGTCAAAGAAGGTGCCGAAA
TTCGCAGACTCTAATGAGAAACCAACTAGGAAGAAGAAGTCTAAAAGCGCTGAATATTAT
AAGATGCGATTTCGGAAAACGTTTGCGCAGCTGGTAGAAGAGGATGCAAGTTTTAGATCA
AAACCTCCTAACTACTTGTCCGCACAAGCGCCACCTTCTAAGTAAAAGCACTTATTTCCC
GAGCG
(785 bp)

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