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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13877_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:134.52 TPM:69.98
ORF EntryO_BomoMSG3554_complete:A_BomoMSG_c13877_g1_i1
Sequence
(Nucleotide)
CGTAACTTTACTTCAGCTTAAATAAAACGAATATTTATTATAATTTAATTACAACTTTAA
AAAAGTTACTCAGGGAGATTTTAAAGATATTTTTCAAGTTTAAATTTATTAGATGTCAAA
TAACATTTTTGGCAATTTGCCATGAACTTCCGGTTCAAGATAAAGACACACGCGGATCTA
GTGGGAACAGAATCTAAATAATTTTAATTAACCGGGAAAGAAGACCAAATTATTTATTTT
ACGCTCTGCAACTATAATGTCCAATAACGGTGCTCCGGATTCATGGGAAAATGAAGCGGA
AATAATAGGTGAAAAAGGTGCAAAGGATTCTAATGATGTGTCTTCAAAAATTTCCACGTT
GAATGTAAATGCCATGGAATTCGTGCCTTCTTTTTCTAAGCCTTCTCAGGCTAGCGATAG
TACCGATTCCCCTACCTCCCCCCAGAAATCAGAAAGCGGTTCTTCGAATTCAGCCGGGAG
TCCCGTCTTAAACGGATGTGGCGATGGAGGCGGAGAAAGCAGTGATGGTGGTGCAGCATC
TGCTTCTCCACGTGTTGAAGAACCACCACCTACTACTGCATCTGTCCCGCCCGATGTCTC
GCCCACTGCAGACAGCTGGGAAGTTGAGGCTGATGATGCACTACTCACACCTGAAGAAAA
CAATGAACCGGAAGAAGAAGAATTGGATACACAAGTAGGAAACACAAATCCTAACGAGGA
TGGTGAATTAACAAAAAAGATTCCAAAGAAAAAACCACCACGAGTAGAAGATACACGAAG
CAAAAAAGAACATGTAAATGTAGTATTTATAGGACATGTAGATGCAGGAAAGTCGACTAT
TGGTGGTCAAATAATGTCACTCACTGGAATGGTCGACAAAAGAACATTAGAAAAATATGA
AAGAGAAGCGAGAGAGAAATCAAGAGAATCATGGTACTTATCATGGGCACTGGACACAAA
TCAAGAAGAACGAGACAAAGGCAAAACAGTAGAAGTTGGAAGAGCTTATTTTGAGACTGA
AAAGAAGCATTTTACAATTCTTGATGCCCCTGGACACAAAAGTTTTGTTCCAAACATGAT
TGGTGGGGCTGCTCAAGCTGACCTCGCTGTATTGGTCATTTCTGCACGTAAAGGCGAATT
CGAAACGGGTTTCGACAGAGGAGGACAAACTCGTGAACATGCGATGTTAGCTAAAACAGC
TGGAGTGAAACATTTGGTAGCACTTGTAAACAAGATGGATGATCCAACAGTTAACTGGGA
TGAGAAAAGATATAATGAATGTCGAGACAAAATTTTGCCTTATCTTAAGAAATTGGGTTT
CAATACAGCGAAAGACCTATCCTTCCTTCCTGTTTCCGGCCAAACTGGACAAGGTTTATT
AGAACGACTAACTGAAGATGTATGCCCATGGTACCGTGGACCATCTTTTATCCAACTCAT
CGACGAGCTTCCGTCTCTAAACCGTAAGATCGATGGTCCATTTATTATGCCTGTTGTTGA
TAAATATAAGGACATGGGAACGGTCCTCATGGGCAAGGTGGAAGCGGGAACTACACGTAA
ATCCAGTACATTATTTCTGATGCCAAACAGGGTGCAAGTAACAGTTGATCAACTTTGGTC
CGATGACATTGAGGTAACCTCTATTGGGCCTGGTGAAAATGTCAAAGTAAAACTTAAAGG
AATTGAAGAAGAAGATGTATCTCCTGGTTTTGTTCTTTGCGACGTAACCGAACCGATTAC
GACAGGAAGAGTTTTCGATGCCCAAGTTGTGATTCTAGAACACAAATCCATCATTTGTGC
TGGTTACTCTGCTGTTATGCACATACACTGTGCTGCTGAAGAAATTACTGTTAAGGCTTT
GATTTGTTTGGTTGACAAAAAGACTGGAGAGAAGTCGAAAACGAGACCACGCTTTGTGAA
ACAAGATCAGGTTGCTATTATGAGGATAGAATGTGCAGGAGTTATATGCTTAGAACCATT
CAAAAAATTTGCTCAAATGGGCAGGTTCACATTAAGAGACGAAAATAAAACCATTGCGAT
CGGAAAAGTTTTGAAGGTGATTGAGTAAATCGGCACTACATTGTAATTTAGCTAGGTTAG
GCCTTTTGAGAACCTATTAATATTTGCAAAGTGCATGTAAAATGTATTCCAGGGTCTCAA
AATCCTGAAAAAGCTCGAGTACAGCTTGTTATATTATTTTTCATAGGAAACAATATATTT
TCTGC
(2225 bp)

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