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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13858_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_34_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
Transcript
Level		FPKM:2.28 TPM:1.18
ORF EntryO_BomoMSG3545_5prime_partial:A_BomoMSG_c13858_g1_i1
Sequence
(Nucleotide)
CCGCCGCACCGCTCCTCCTCCGAGGCCAGCGTCAGCATGGACCAGACCAATTCCGACGAC
GATCCGTGCGAAGAATTAAGTACTTCAGGCGAAGAAGCCGGTCCGACGCCAAGGAAACAA
AGCAAACATCAACGTGAACTAACAGCCGATCAAGACTGGTTACGTGAAGGGGAAGAGCTG
GCGAAAAAGGAATGCACCCCATTAAAGTCCTGTCAAAAACGCAATAAACGCGCCGGAAGC
AGCGGCAGCGCTAGCAGCGGAGCGGAGGAGCTGCTCCGTCCCCGCAAGAAGAAACTCTAC
AAAAAGAGACACAAACCGGGCAAAGCTAGGCATTTCCTAGCAACGCAGCTGAAGACGTCC
GAACTGGCCGAGTCCGTTTCAGAAGTGGAAGAGGAATCGTCTGGAAGCGAGACCGCGCAT
TACCAGCTGCTCTGCGATAACGTAGACGCTAGGAGGTTGATGGAGCTTCGATTGATGGAG
AGCTACAAGCGACGAGCCGGTGACGAGGAGGAGGGCAGTGCATCTTCCGCGCTGTCTCCG
CATTCGCATCCGCACCTGGCCGACCTCGACGAGGACGACTCCGCTTGTGAGGAAGAGTTG
GCTCGACTGGCACAGCAGGCCCAGTGTATAACGGAGTACCAGGCACAGAGCGCGCTGGCC
GGGGCGCTGGAGGGCAAGCGCGGCCGGCCCGCCTCGCCGCTGCCCTTCAACGCGGACGAC
GTGTGCCGGCCCGGGAACACGCTGCTGTGGGACCTGCTGCAGGACGGCAACATTGAACAA
TTAGGCGAAGGATTGGCGTTAGAAGCTGAGAAGGCTCTATGCGCCCTACTTTGTTTCAGT
ACCGACAAATTTATAAGGAC
(860 bp)

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