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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13839_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:17.35 TPM:9.03
ORF EntryO_BomoMSG3541_5prime_partial:A_BomoMSG_c13839_g1_i1
Sequence
(Nucleotide)
GACGTGTGCTCTTCCGATCTATGTTTTCACTGTTTTATATTCATTTATAACATTTGGTGT
CACCAATGATCACAGCAGTGTATCTGTATTGGACCCATCTGATAATGTTTTTAGAATAAG
ACTAGTCTGCGCTCTGCTTGAGACTTGTGGTGCATACTTCAACAGTGGTTCGAGCAAAAA
AAGATTAGACTATTTTTTGACCTTCTTCCAAAATTACTATTGGTTCAAGTTCTCTGATCC
GATATGGACAAAAGACTATCAATTCCCTATTTACGTTAAATATATTTATCAAGAATGCCT
GACGACTTTACGCCCTAAGTTGACTTTGTTTACGAGCTGGCAACAGTGTAAGGATGCAAT
AGATGAACTACGACAGACTTTATATCCGGAGCTAGGAGAGGAAGAGTACGATAATGAGGA
TCAAGGTGATGATAGTGTGAACGACGGCTTAGACACAATCATGGAAACGGATGATGAAAC
GGACAATCCGCAATTGCCTGATGAAAGCTCTGATGAAGAACCGATTACCGAAAATAATGT
TAATGACGAAAACGAAATGCAAGATGAAATGGCAATTGAGCCACGAAGACCTGCTACTAA
ACATGTAGAAGACGTTGAGTTCGAATCGGCATTCGAGAAAATGGTAACAGAAAATATTGC
AGAAAGACAACGGGAGAATAGACCGCAACAACGCGACATTGCTGTCCCGATGACCTGCAG
ACAGACTACGAAGAAGACGTATGAACAGCTCTTGCAAGGAAAAGAGGGCGTGGAATTCGT
TCTTATGGTTCGTAAAGGAACGAAACCACAATATAAATCGTTCAGTGCTCCACCGGAATT
GGCCAGCAATCTACAACAACAAGCTTTAGCTGATAAACAAGAAATGGAACGAGTTAAACG
ACTTACTCTAAATATATCGGAAAGACAAGAAGAAGAAGAATATAGCGCAGAGAGCGGTGG
TGGATCGGGAGGTATCGGTAATCCTAACAGAGGTCAGCATGTTCGTCAGAAATACCAACA
TCCCAAAGGGGCACCGGACGCCGATCTCATATTCGGTCCTAAGAAATTTAAATAAATAAA
AAACTAATGTATGTAATGTATTGTAATAATATATGTAATAAAAAAAGGGTTTTTTTTCTT
TTTCAAAAAAAAAAAA
(1156 bp)

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