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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13543_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		peptidoglycan-recognition_protein_SC2_isoform_X1_[Bombyx_mori]
Ontology
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0008270 F zinc ion binding
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0016787 F hydrolase activity
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.07 TPM:1.08
ORF EntryO_BomoMSG3391_3prime_partial:A_BomoMSG_c13543_g1_i2
Sequence
(Nucleotide)
GAAAAACGTAGAGAGCCGTCGTCTGAGTGGTTAATCATCTCGGTGCGTCATTCCATTGTT
TTCTGTGTATGTGTGTGCGTGTGTTGTGTTTTTCTTGTTTTGTTTTAAGTGCTAGCCATG
AAGAGTGATGGTGATGAAAATCCTAAACACGAGACGAAAAGCCCGCCTCCTATCAGCTCT
GACGTAGCTGTAGTGGACGACAGAATAATGGCAGTTGCAACGCAAGCTGCGAGTTCGACG
CCTATATCACAACTCAATGTAACAAAGTCGTCACGGGTCCATATCGGACCCAAGTTCATA
TCAGTAACTCAAACCGTCAGGAATACAGAAGAAATCAAAGGCCAAATACTCGGTCAGGAG
CTGATATCATCTAAGAGCACACGCAAACTCCGCTGTAGTATCGCCGTGTTTGTTTGCTGG
ACGCTCATTGTCACATTAGGACTGGGCTTCTACATATCCCACTACGCGCTATCCAAGCTC
ACACGTCTCGATCTAGATATACACGAGCCCTGGTATCTTCGTCGAAGTGACTGGCAAGCG
ATGTCGCCATACTCAGTGGATTTCCTCGATTTACCCCTATCCTTCGTCATAGTTGGTCAC
AGCGCTACCAACTACTGTACTGAAAAGTACGAATGTATTAAGGAAATGTTGGATGTGCAG
AAAAGCCATTTGCATCGCGGATGGCAAGATATCGGTCCCAATTTCCTCGTGTCTGGTAAC
GGCATCGTATTCGAAGGCAGAGGCGCTAATGTGTTCGGTGCAATGGCGATAGCTTGGAAC
CGCAGAAGCATACTAATCATGTTCCTCGGGGATTATACAAAGGATAAGACGACACCTGTA
CAGTTTGAACACTTAAATATCGTCTTAGATCAACTTGTAAAACAAGGAGTCTTGCGACCT
GATTACACTTTGTATGGCCAATGCCAGGTAGCGTCGCTCACTATAAGTCCTGGAC
(955 bp)

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