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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13102_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		syntaxin_isoform_X1_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0000407 C phagophore assembly site
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0010008 C endosome membrane
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0045121 C membrane raft
GO:0045335 C phagocytic vesicle
GO:0048278 P vesicle docking
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:17.93 TPM:9.33
ORF EntryO_BomoMSG3216_complete:A_BomoMSG_c13102_g1_i1
Sequence
(Nucleotide)
CCGATCACGGCTGTTCCTGATATGATGATTGGATTGAGTTGAGAGACAAAGAAAGACAAA
AATTTTGTTAAAAACCTGTATCTAGTAAACAGTGTTGGACCACATTAATTCTGAGCACAA
TGTCAGAACGAGAACCAATTAATGGTTCAGGGCGAGACTATGGAGCCACAGCCTCTGTGC
CGGCTGTGGGCTTTGCAGATTTCAGTCCAACGGAACTCTACAATTTGAGTGAGGGCATCG
CAGAGAATGTCAATACGATTAACAGTGGACTACTGTCGCTTGAGAAGATGATGAAGCAAA
TCGGTGGCCCAAATGATAGCGTCCAACTTAGAGATAAAATTCACGATACTCAACAGACGG
TAAACAGTTCAGTATCGGCCACGGCGCGAGACATACAGCGACTGGGCGTTGTCGTTCGTC
GTGGTGACAAACCGCAGAAGTTACAGGTCGAAAGATTGACGCAGGCCTTCACGGATTGTC
TCGCTAAATATTCGTCGGTTCAAAAGAAAGTATCAGAGAAGATGGCGGCTCACATGCCCA
AACCGGCACGCGTGAGAAACGATCCACAGCTGTTGGAGCAGCAAGCGATGGCTGACGACG
AGGAATCGGCTGCTTTAGCTCAGCAACAAGCTCAGGCCCGTCTCGTTGAGTTTGAAACGA
GCATGCTGCTTGAGCGAGAAGCCTACATGAACAAAATAGAAGCTGACGTTTTGGACGTTA
ACCAAATAATGTCTGATCTGGCGAAGATGGTGAATCAGCAAGCCCAGACCGTCGACACGG
TGGAGACCCACATAGAGGCGGTGGGAGCGAACGTCGAGGCCGGGGTCGATGAACTCGCTA
AAGCAGCCGAACACCAACGCAGGTACCGGAGGAAAATGTTCATATTAATTATCATAGGCG
CGATTCTTGCTATTGTCTTCATTGTGTGGGTAGTCAAAGCCTTCAAGTAGATCTTATATA
ATATATTCGTATTGAACTGTAATGACATGTTGAAATTATCAGCTGTTTTCTATATCCTAG
CTATCTATGTTTTTA
(1035 bp)

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