SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c13036_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		biotin--protein_ligase_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0003824 F catalytic activity
GO:0004077 F biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078 F biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079 F biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080 F biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0005524 F ATP binding
GO:0005652 C nuclear lamina
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006464 P cellular protein modification process
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0009305 P protein biotinylation
GO:0009374 F biotin binding
GO:0016363 C nuclear matrix
GO:0016570 P histone modification
GO:0016874 F ligase activity
GO:0018271 F biotin-protein ligase activity
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
GO:0070781 P response to biotin
GO:0071110 P histone biotinylation
Transcript
Level		FPKM:3.24 TPM:1.68
ORF EntryO_BomoMSG3188_internal:A_BomoMSG_c13036_g1_i1
Sequence
(Nucleotide)
CTGGCTGTCACCGCTCGGACAGGCCTCCATATCCGTGCAGATATGGCACAAGATGTCTCC
GTCGACGCCGCTGGTACAGCACGCGGCCGCCCTCGCAGCGGTACAAGCCATACGATGCCA
ACCGAACTACGAAAACTTAGACATTAGGATAAAATGGCCTAATGACATCTACTACGGCCG
GGATGTCAAAATAGGCGGCACCATCACCACAGCGAACTGCATGGGCGATGACGTCATCCT
CAACATAGGGACCGGTGTGAACATATCAAACAAGGTGCCGACGACGTGCGTTAACGACAT
CATCGAGGAGTACAACGAGGCGCACGGCGCGGCCCTGGCCCCCATGTCCATAGAGAAGTT
CCTAGCGCGCTACTGCACCCAGTTGGAGCGGACCTTGGACCAGCTGGCGGCCGATGCGGG
CATCGAGGCCTTCTTGCGGCTGTACTACGAGTACTGGCTTCACACCGGAGATCGGAAGAG
CGT
(483 bp)

- SilkBase 1999-2023 -