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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c12981_g1_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		tudor_staphylococcus/micrococcal_nuclease_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016442 C RISC complex
GO:0031047 P gene silencing by RNA
GO:0042470 C melanosome
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:155.36 TPM:80.82
ORF EntryO_BomoMSG3170_complete:A_BomoMSG_c12981_g1_i1
Sequence
(Nucleotide)
GCCACGTTTCGCCTGTCTCACTTCTCTGAGAGTTTTGTGTCGTCTTACTAGTTGAACGCT
CGTCAGTAATTTCAGACTCGTATCCTACAAAACAGGATATCAGAACTATTTTCATCGAAA
ATGAGTGCTCCAGCACCGGCACCTGCTTACAAAATAGGAATAGTGAAGCAGGTACTATCG
GGAGATACGGTGGTAATAAGAAAACAGCCTCAGGGCGGGCCGCCTCCAGAGAAAGTGATA
GCCCTTTCGGGTATCACCGCACCTAAACTCGCTCGCCAAAGGACCGCCAACAATGACACA
GAAACGAAGGATGAACCATTCGCGTGGGAAGCCCGTGAATTCCTAAGGAAGAAGCTAGTC
GGCAAGGAGGTTATCTTCACTGCTGAGAAACCGGCGAATTCAGCGAATAGAGAATATGGC
GTCGTATGGGCTGGCAAAAATCCTTCCAAAGATGAAAATGTTACTGAAGCCTTGCTGGCT
GAAGGTCTCGTTAAAGTTCGAGAAGGTGCTAGAAATATACCTCAGCTCAAAAAGCTGGTA
GAGATCGAAGAGACAGCCAAATCGCAAGGCAAAGGAATTTGGAGTACTGATGCTGATAAA
CATGTACGAGACATCAAGTGGTCTATCGAAAATCTGAAAGCTTTCGTCAACAAATACAAT
GGTAAGCCTGTAAAGGCTATCATTGAATATGTGCGTGATGGTTCTACAGTACGTCTTTGT
TTGTTACCTGAATACACTCCCATTACACTGATGCTATCTGGAATTCGATGTCCCGCTGTA
AGACAAGACGGTGAATCTGAGCCTTACGCAGAAGAAGCACGCTTCTTCCTGGAGTCCAGA
TTGCTGCAGAAAGACGTCGAAGTAGTTCTGGAGTCCGTTAATAACAACAATATCGTGGGC
ACGATACTGCACCCGCAGGGTAACATCGCTGAGGCCCTACTAAGACAAGGGTTCGCGAAA
TGTGTCATGAAATCAGGTGCATCTACATTGAAAGCCGCCGAAAGTGCAGCTAAGGAAGCA
AAACTGCGCATATGGATAAATTATGTAAGCAATGCACCTATAATCCCGGCGAAAGACAAG
GAATTCACGGCCACCGTGTTGGAAGTAGTCAACGGAGACGCGCTCGTTGTTAAAACACAT
AGCAATGTACAGAAAAAAATATTCTTAGCTAGCGTCAGGCCTCCTCGTGAAAAGAGCAAT
GCTGACGACGACAATAAACCTATACCGAGGCCAAAAGGATTTAGACCTTTGTATGATATT
CCATGGATGTACGAGGCACGTGAATTTCTTAGAAAAAAACTGGTTGGGAAAAAAGTTAAT
GTGACAGTAGATTACATTCAGCCAGCAAAAGATAATTTCCCAGAAAAGACATGTTGTACT
GTCGTAAGCGGTGGCACGAACATAGCTGAAGCTCTGGTGACTAAAGGGTTGGCAACAGTG
AAGTACAGAAACGATAATGACCAAAGAAGCTCACAGTATGATAAATTATTGGAGGCTGAA
TTGAAAGCAGTTAAGGCCGCAGTTGGTATTCATAACAAGAAAGAAGTGCCCACCCACCGT
GTGCAAGACACCAGTGGAGATCCAACGAAAGCAAAAAAATTCTTCCCATTCCTCAAACGT
GCCCAAAAAACCGAGGCTACTGTGGAATTCGTTGCTAGCGGATCGCGTATGCGTTTATAT
ATTCCTAAAGAATCCGTCTTAGTAACCTTTTTGCTTGCCGGCATTAACTGTCCCCGAGGT
GCGAGACCTGCAATTGGCGGAGGACCCAAACAAAATGCAGAGCCTTTCGGAGAAGAAGCT
TTGCAGTTCACGAAAGAAAAGTGCTTACAGCACGACGTCTTAGTCAGCATAGAAGAGATT
GACAAAGCAGGAAACTTCATCGGTTGGCTCTGGGTTGACAACGAGAATTTGTCCGTTTCG
TTAGTCGAACATGGCCTTGCCTCGGCGCATCACACGGCGGAAACGTCTGAGTTTGCACGC
GCCATAAAAACCGCTGAAGAGAATGCAATTAAAAAGCGTATCGGCGTATGGAAAGACTAT
GTCGAAGAAGAAAAAGAAGTCGAAAAGGAGAGAAATGCAACCGTACAAGATCGTACTCTT
AAATACGACCGCGTGGTCATCACTGAAGTCACTCCTGAAGGTCATTTCTACGCACAAAAT
GTCGATTTAGGTGTGAAACTAGAAAGTCTTATGGAAACTATACACACTGAGTTTAGAAAC
AGTCACCCATTGCCTGGATCTTACGCTCCAAGGAAGGGAGCCATCTGTGCTGCTCGTTTT
ACAGCCGATGACCAATGGTACAGGGCAAAGATTGAAAAAATAACAGACAATAGGCAGGTC
CAAGTTGTATACATCGACTATGGAAATCGAGAGACGTTAGACATAACCAGATTGGCAGCA
CTCCCGGTGGGTACTGAGCACGATTCGCCTTTTGCGACAGAGTATGTTCTCTGCTGTGTG
AAATTCCCCTCGGACCCTGATGACCGAGCAGAAGCTGTAACCAGTTTCTATAATGATGTC
GTTGGCAAGAGGCTGCTCTTGAATGTAGAAATCCGTGGATCACCAGCTGCTGTTACCCTT
GTTGATCCTAACACAAACATTGATCTGGGCAAGAACCTTATCAAAGATGGGCTCGTGTTA
GTGGAGCAGGTTCGTGACAGCCGACTGGCAACATTGATGGCCGAGTATCGCGCCGCTCAG
GAGCACGCCAAGAGCTCGCGACTCAACTTGTGGCGGCACGGTGACATCACCGAGGACGAT
GCGGTAGAATTCGGGGTGCGTCGCTAGCTGTACGCCCCCGGCGTTGACGCCACCACATCG
CCCACGCACATCCGCAACTGTGCCACCTGCACCACTGTAGATGTCGACAGCATCGTCCAC
GCCATTCTTTACCACATACTGTGAACTATAAACTGAACAATGAACTTTAAATCATGATGT
AATTCAAACTTGGATGTTGTGAACAATTGTTTATTAATCAGAAGTTTATTATTGCTAATT
ACGATACGTGTGTTGTGCCGGAGGACATTACGATGGTGAGCAGTGAACACGGCAGCGGAA
GGGGTGCCGCAACACTTACACGCTAGCATACCGAGCATAATTCATAAAAACATATTTTTT
AAATTTACAAACATATTTTAGAAATTAAAACAGATTCATAACTATAATAGATTAAATAAA
TTATATAGGTCGCTGATTTAAATACTTAATTACCTACAAACTAATATATTAATATGTAAC
TATTTAAATAAATGAATTTATTGATAAATGCCTGTTGTTGGTCATAATATAAATGTGTTA
CAGATTTGTATATCAG
(3316 bp)

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