SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c12606_g1_i2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		calpain-11_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.83 TPM:3.55
ORF EntryO_BomoMSG3033_5prime_partial:A_BomoMSG_c12606_g1_i2
Sequence
(Nucleotide)
GGGCGCGCGCGCGGGACGGGCCGCCGCTAGTAGCGCGCCTGCTGGCCTGGCGGGCCGCCT
ACACAGGGTTAGCGCCGAGCTGCAGCGCTGCCTCCTCGTACCGGCTGCGGGCGCTGCTGT
GGGCGGCGGGGGTGGCGGCCTCCAACAAGGTGCTGGAGTGTCTGGTGATGCGCTTCGCCA
AAAAGAACACAATATCTTTGGATGCCTACCTTATAGCCTTGGCCAAACTACATTTAGCAC
ATGAAAGGTTTCGATGCTTAGAAGCTAAATTAAAATCGAACCCAATATCTTTGGAAGAGA
TGATCCTGATGACCATTTACTCGTGATCCGGGACTCGTGTTGTTTGTTACTGTTATATTG
TTATATTGTTACTGTTGAGTTTGTTGAAACAGTTTTCTACATTTATTTATTTACTCACAG
ATGAAGTTATTCTGTAAAGAACGCCATTAACAGAACTTGAATTAGTCTCTTTCATAATTT
AACTAGCTGACCCGGCACACTTCGTAGTGCCTCAATCGATAA
(522 bp)

- SilkBase 1999-2023 -