SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c1205_g1_i2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		crossover_junction_endonuclease_EME1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0036297 P interstrand cross-link repair
GO:0046872 F metal ion binding
GO:0072429 P response to intra-S DNA damage checkpoint signaling
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.61 TPM:2.40
ORF EntryO_BomoMSG253_internal:A_BomoMSG_c1205_g1_i2
Sequence
(Nucleotide)
GGGGAACTTGATTTGGAGCTCGCTATTACCGATTTGCTGGTGACGACCGACTGTGACACG
GTCCTGGTGAACTCCTCGAGCGAACTGGCACTGCTGATCGTCCAGCACACCAAGGCGATA
GCCGAGGCGCCGTACAAAATGTCGAAGCGCGCTTACGACGAGCAATCCGAATTGTACTTG
CGGGGAGAAAACAGGAAATGCGTCACCGTCGACAAACAAGGCAACGGAGTCAGTCGGCTG
TGGCAACAGATGATAGCTGTACTGCCACATTCCAGTTTAGAAACGTCGAGAGCATTGTGC
GCTAAATATCCAACTCCGCTTGACCTGTATGAGTCCCTTAACTCACCGGATAGTGTTAAT
GAATTGGCGAA
(371 bp)

- SilkBase 1999-2023 -