SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c11838_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		rRNA-processing_protein_UTP23_homolog_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:16.94 TPM:8.81
ORF EntryO_BomoMSG2793_3prime_partial:A_BomoMSG_c11838_g1_i2
Sequence
(Nucleotide)
CTGACGGCGGCACAATCACAGCTTAACATAAAAAATAAATAAAGTAATTTATGTACAATA
AAACAACACAATTGTCAAAGTGAATGCATTAAATATATTTACATTACAAGATCATAACTT
AATCATAGATTGAACACTAAAGTAAACACCTAAAAAAAAGACAATTCACGAAAGCGAGTA
TGGACAGTAAGTGTCGCCGTAACGGTCGCCTAATAGACATAGTTGATGAGGACTGGCGTG
CGGAACAACTTCCTCACGAGGACATTCAAGTTCCGCTGGATGAGCTCCCGGACCCCGAGG
CAGACAGCGCCGACTCTCATCTCACTCTAAAAGAGCAGAGCATGCGTTGGCAGGAGAATT
TCCCTGAACCAGCGAGCAGTAATCAAAACTAGGAGCATATTAACATCAGAGAGCAAATTC
CCAAGTACCTAAACAGCCAGGCTAAACTACTGACAACGAGATGTATAATTATAGAAACAG
AAAAATTAGCAAAGAAAACACATGGAGCTCTCACAATATTAAAACAGTTTGGTATTCATG
AATGTGGGCACAAAGAACCGGTGGCTGGATCTAAGTGCATAATGTCCATGATTGGTAAGA
AGAATGAAAAGCATTATATCTTAGCTACCCAGGATCGAGATCTGCAATCCAAATTAAGGG
AAAAACCTGGAGTTCCTCTGCTATATCTACATAACAAGTCACCAACATTAGAGAAACCAA
GTAGTGTGAGCTTTGACAAAGCAGGTCAAGCTCTGGAAACCAATGAACATATTTTTATCA
CTGAGAATCAGAGTGAAACTTTGAAGCAGATGAAAAAGAAATTAGGTGTTGAAGAAAAGG
TTGAAGAACTGAATGTCCCTATTAGGAAGAAAAAGCCCCATAACCCTAATCCTTTGTCTT
GTAAGAAAAAGAAAAATAAACCAAGCAGACAAGGAACAAAAAAAGAAAATGTGACTGAAG
GAAAAGTCCGGAAAAGGAAGAAAAATAAGTTTCCGA
(996 bp)

- SilkBase 1999-2023 -