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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c11584_g1_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		protein_TRC8_homolog_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:31.92 TPM:16.61
ORF EntryO_BomoMSG2702_complete:A_BomoMSG_c11584_g1_i1
Sequence
(Nucleotide)
TTGGCAACAGGGCAACATCTAAATTTGTAACGTCAAATTTTTATTGTCGCAAATTTTCAG
TCATTTTTTCGTATCAATTTACGTTTTTTTTTTTTAAAACAAGACGAATAAAGCACATCT
TTATAAGTTCAATTTTATGTATTAAAATATATCTCAACTTGGTATAGTAGACGTATGCAG
TGTGTAACAGATGCTTGTGTTGTATTTAAATTGTCAGTGATAACGTGTGTGACTTTCCGC
TTAAATGAATAATGTCGCTGAGGTTGAAGGCCCTGGCACTAGTGGAGGTGCTACTGAGGG
TGCCACCGTTGTTTGTGGTGGATGAGTTCCTTAAGATCAGCCTAGGGCTGCCCGTGTCCA
GCGAGGAAGTGCCAGTATTGAGCAATGTCACAGTGGACCACGTCGATATATTGGAGCCAG
ATGTGAATTACTACGATGCTAACTTCTATAATGCATTTTTCGTCACTTTTTTCAAGTTCC
TCGTTTGCTGTTCAGGATGTTTATCGTCACTCTGCATTTTCGTGCTATACGCGAAGCACC
TCATCATCGTATACCTTTACCTCACGTCGCTGGGCATCGTGTTCGTGTCGTACTGGACCA
ATGTATCCGCAATCAAACAGATACAAGCTCTCGCACAGCTAGCCACCTCGCCTCACCACT
CGTCCAGCATCCTCGAAGACATTCTAAACTTAAACCTTAAAAATCTGTTCGATCTCGACG
GACCCGGCGTTTTGGTGGTACAGAATTTCGCGATACAGTTCGCTCTCTCGATCGTGTTCA
GGAACGTTCACTTGGGGCCCCGAGTGCCTCTAATACAAAAGCTACTGCCGGTCAGTTTCA
TGGCCCCCTCGTTTTTGGCCATGCTACCGATGCCGCCAAATCTCCTGCACCATTCACCAG
TATTTTCGTCGTTACTACCACTTCTCCTTGTCAAATTTGTATTGTGGTCGTCGACTTACA
CCATCATTCACGTTATCTACGCCGGCTACCAGCACGGTAGATTGTTTGTTAGCAATTACG
GTCTGTCGGCGTTAGTCGAAACTGAGTGGATGCGACTTAACGTCCCCTGCGTTTTGAGGG
TTTTCTGGGTGCTGCGAGTCGCCGAGCACGCCATTCTCCTGCTCATGGATAACTACGATG
AAGACACAGAGGAAGGTGTCCGAATATCTACGCTGCTTGCTGTGCAATCGCTCGCTTCAA
TGGCCAAATCCTTACTGGTGACGGGCTGTGAAACCATCACCGCAGTATTAGGAATGACAT
CAGTGATCTCATTTTTCTGCCATTACATTGGAAACTTCTTCCAGTGGATTCTGTTGACCG
ACGAGGAAGAAGACAAAAGTATCGGAACCGTATCGGCGATTCTGTTTTACATTTTAGCAC
TCCAAACTGGTCTAACTTCTCTACATCCAGAGAAGAGATTCATTCGTTTGTGCAAGAACG
TCTGCTTGTTGTTCACGGCTCTATTGCATTTCCTACACAACATAGTCAATCCGATGTTGA
TGTCGTTGAGTGCTTCGCACAATCCGAGCATTCACCGGCACGTCAGGGCTCTGGGCGTAT
GCGCGTTCCTGATAATCTTCCCCATATCGCTACTAGTGTATTTGTGGTCTCAACACAACG
TGTCCACTTGGCTATTAGCGGTCACCGCCTTCAGCATAGAAGTGATAGTCAAAGTGGTCG
TTAGTCTCATGATATACTCCTTATTCCTGATCGACGCCTACAGGAGCACGTTCTGGGAGC
AGTTGGACGACTACGTGTATTACATACGCGCTTTCGGTAACACGATCGAATTCTGTTTCG
GCATTTTCTTGTTCTTCAACGGGGCCTGGATCCTGCTGTTCGAATCGGGCGGGGCGATCC
GCGCCGTCATGATGTGCATACACGCGTACTTCAACATATGGTGCGAAGCGAGAGCCGGCT
GGTCCGTGTTCATGAAGCGTCGCACCGCGGTGAACAAGATCAACTCGCTCAAGGAGGCCT
CGTACACTCAACTCAGCAATCTGGACGACGTGTGCGCGATCTGCTACCAGGAGATGCACT
CGGCGAAGATAACGCGCTGCAACCATTTCTTCCACGGCGTCTGCTTGAGGAAGTGGCTGT
ACGTGCAGGACCGGTGTCCGCTGTGCCACGATATCCTGTACAAGATCGACAACGATGCGA
ACAAAGACTCGAACTCTGACGCCGAGGCGGAGGAAAACAGAAACAACCAGAACCATGTGT
TGGAAGAGGGGGCGGACCTACTGCTCGGGGATGGCGTGAGGTGGCTCCGCCAGAACTAAT
CTCCCATACTCGCTTAAATGTCTCTAAAGTATAATAATTTATATAACGACTTATTTGTGT
GTGTGGTATAATCCTTTCGATTTGTATAGTAAGTTATTCGTTTTAATATTATAGTTATCA
AAACGGCACACCTGTGATTTACGATTCTTTATATTATTATTATGTTTCGTGATAAATGAT
ATTTCGTTAAGGGCGTTTGAACGTTCAAATGGACGTGTGGCTTTCGGAGTTCCCTAAAAT
GTACAAGTGAAAAATTACTAGTTTTCAAATTTATCAGGAGCTAAATGCAATAAATATTTA
TAAAAACAAATATAAATGCTTTAAAACTTTAAAAAGAAAAAATACCGATTTTTTACAGAA
CGTTACGTACATATATGGCT
(2660 bp)

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