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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c11572_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		pinin_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007155 P cell adhesion
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0030054 C cell junction
GO:0030057 C desmosome
GO:0035145 C exon-exon junction complex
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:25.37 TPM:13.20
ORF EntryO_BomoMSG2692_complete:A_BomoMSG_c11572_g1_i1
Sequence
(Nucleotide)
GTTTGATGTGTAGTTTTTGTTGTCTGTGTATTTGTGTTTTACCTGTGCGTTTTGTATCAA
TTTTCAGCTATTCTAAAGAGAATTTTGTTTTAGATGATACCAGTATTTTCTCGTAAATTG
TAAATAGAATGGGGACAGAAGTAGCTATATCTTTTAGTTCTTTACGAGCACAACTAGAGA
ACGAGAAGAGTAACCTCTTTAAACTAGATGAAAACATTAAAAAGATTGTTCAAACCACAG
GACGCTTTGCGAATGATAGATTTAACTCAGGAGACTATCCTAGAGGTGGCAATCGTATCG
GAAACAGAAATTCTTTTACAGAAAGCGGTAACAACTTCAAACCTGATGAGCAATTTGGAA
AACGTAAACAGGAGACAAAAACTGTATTTAGCAGAATATCAGCAAGAGCTGACAATAGTG
ATGGTGAGGATGACTTACCAACGAACAAAAGAGTTCGGGTGTCATCAGCAGTGTGTAGAG
AACTACCAACAAGAGCAGCAATCCTTAAAGCACAGGGTGATGATGAACAGGCACGCACAC
GGAATAGAAGAATTTTTGGTTCCTTACTTGGTACATTACAGAAATTTAAACAGGAAGAAA
TTGAATTGCAGACTAAGGAAGATAAGAAAGCACAAGTTGAAAGGAAAATAGAAGAGCAAG
CAAGATTACAAAAGGAAAAAGAATTTAGAGAGAGAAAAGTAATGTTTGCAGAAAGAGAAC
AGAAGAAAGCCACAATAAAAGCATTAGAAGCAAAGATGGGTCGAGTACAAGAATTTGAGA
TCTGGGAGACAACCCAGAAGAACCTTAGGAATTTTATATTGACTAAAGCAAAGCCGCATG
TATACTGGATGCCGAAGAAGTTGAATGATAAAGCGAAAGAAAAGTTGGACTTGAGTCAGA
TGTACCATGATAAATGTGTTATAAAGAAACGCGAAGAACTTCAAGATGAATTATCTCGTA
TAGAACAACGCTGCACTAAACGTTTCCACCAACAAGGGCCGGAACAGAATGGACAGCAAG
TTAAGGAGGAAAAACCAGATAAAAAGACGAGAGACAAGTTTGCAGCTGACACTGAAAGAG
ATGACAGTGATGCTGATGGACCGGATGAGGATACTCACGAAGACACCACTATGACACATT
CAAATCAAGAAGAGACGATAAAACAAGAAAATACACCAGAAATTGTTGAACCACAAGATA
GAAATATAAAAGATGATGAAGGTAAAATAATTGAAAAACCATCAGAGGTGAATGACAATC
CTAAAAACGACGAAGTTTCCACCGAAACAACAGAAGAAGTTATTAATCAATCTTAGTAGA
CTTTACATCGACATGACTGGTAATATTATCAACAGAGTAGGAACTTGAAGAACACAAGTT
CTGTGATAAAGGTCTACTTTTATCACGGTATTTCCAGATTTTTCTTACAAGCGTACAGCA
GCTTATGGAAAGTCATTTTGAAGGTACATACACTGGGTAATATCCAGCGAACATTAGTCG
GTCATGTCGAGGCGTAATATAGGAATAAATCTGCAAAGTTGATAAATTTTACAAATAGAC
AAGAGAAAATATTAAAAGTTTATTCGTATTAAAAAAAAAAA
(1601 bp)

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