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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c11290_g1_i1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		nuclear_orphan_receptor_isoform_X1_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007424 P open tracheal system development
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0030522 P intracellular receptor signaling pathway
GO:0035002 P liquid clearance, open tracheal system
GO:0035071 P salivary gland cell autophagic cell death
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045089 P positive regulation of innate immune response
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:3.98 TPM:2.07
ORF EntryO_BomoMSG2543_5prime_partial:A_BomoMSG_c11290_g1_i1
Sequence
(Nucleotide)
CCTTCTTATTTTTTTATTTGTGAAAGTTAAAGTAAATAATAAAATATTCATTAATTATAA
TTTGGTTTTGATTTTTAATTTCATTTGAGTTTGTCTTCGTAGGCTACCTTAATATCACCA
GATAAAACATGGATGGTCAAGATCAGCTGGAAATGAAGTTCAGCAGTGGGAGTGATGTAG
GTGGACTAGAGCTCTGTATAGTTTGTGGAGACCGAGCATCTGGAAGACATTATGGTGCTA
TTAGTTGTGAAGGCTGTAAAGGCTTTTTCAAGCGTTCAATCAGAAAGAAGCTCGGGTACC
AGTGTCGAGGTACTATGAACTGTGAAGTGACCAAGCATCACCGGAACCGGTGCCAGTACT
GCAGGCTGCAAAAGTGTCTTGCTTGCGGGATGAGGAGCGACTCGGTCCAGCACGAACGGA
AGCCGATCGTCGACAAGAACAAGTCGGAGCCGCGGGACGGGCTGGCCGACCGGCAGGCCG
CCTACTCCAAGCTGCTGGGACTCGCGGGCCAGGCTCCCAGCGCACAGCAGCTGACCCCCA
AGGAGGAGGCGGGCGAGGCGTTCGGCGCCGTGTCCCCCGCGCCCGCCATCAACTTCGCCC
TGGCCGCCGCCGTCGCCTTCAACAAGAACTCAGTGTCTCCGTACCTGAACCCCGGCAGTC
CTGGCGACATGGAGGGTGCCCGCAGACAACAGATCATGCTGCAAACGCAATTAGCCAAGA
ATCTCTTCAAAATGGGACAGTTTGGAGCCATCAACGAGTACCTGCAGTCGGCGTACGGCG
CCGCGCCCGAGCCCCCGCCCCCCGCCGACGACGCGCGCCCCGACGAG
(827 bp)

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