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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c10377_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:6.51 TPM:3.39
ORF EntryO_BomoMSG2228_3prime_partial:A_BomoMSG_c10377_g1_i2
Sequence
(Nucleotide)
CGAAAAGTGAACGTTTCACGAGTCAACAGCATCGTTTTTCGAGAAGTTCTAAGCGCTGTT
TGCGACATTTTTCTTTCATTTATTCGTTATCCAATGTTATAAGTGATGAAATAACACGTT
GTTAAGCGATTAATATTGATATTAGTGTTCATAGACGTTAAAAAAGTAATCGACAGATTA
CGATAAGCTAATATGGGCGACGAAAGCCACCCGAAAACTCTCTACGTCGGTAATTTGGAC
CCGAGTGTCACAGAAGTTTTCCTATGTACGTTGTTTGGTCAAATAGGCGATGTAAAAGGT
TGCAAGATTATACGGGAGCCAGGAAATGACCCGTATGCATTTCTCGAGTTTACGTGTCAC
ACGGCGGCGGCCACAGCGCTGGCCGCCATGAACAAGCGAGTGGTCCTCGACAAGGAAATG
AAGGTTAATTGGGCGACGAGTCCTGGTAACCAGCCGAAGACGGACACTAGTAATCATCAT
CACATATTCGTGGGCGATCTGTCTCCAGAAATCGAAACAAACATACTCCGAGAGGCCTTC
GCTCCATTTGGTGAGATATCGAACTGTCGCATAGTACGCGATCCTCAAACGCTCAAATCC
AAGGGTTATGCTTTTGTATCATTTGTAAAGAAAGCAGATGCCGAAGCTGCCATCCAGGCA
ATGAATGGCCAGTGGCTGGGATCAAGATCCATACGTACGAACTGGTCAACGCGTAAACCA
CCAGCGAAGGGTGTGAATGAAGGCGCGCCCAGTAGTAAGAGAGCAAAACAGCCAACATTT
GACGAAGTTTATAATCAAAGCTCACCGACAAACACCACAGTTTACTGTGGCGGTTTCACA
AGCAACATTATTACTGAAGAGTTAATGCAGAACACATTCTCACAATTTGGTCAGATACAG
GACATCAGAGTTTTCAGAGATAAGGGCTATGCATTCATTAGGTTTACTACAAAGGAAGCT
GCAGCACATGCCATAGAAGCTACACACAATACAGAAATAAGCGGTCACACAGTCAAATGT
TTCTGGGGGAAAGAGAATGGAGGTGCTGAAAACCAGGTTCGACACACGGCAGACTCGAAC
AGCACGGTCCCAGATCAGAGCGGGAACAACTCGTCGGCGGCGCCTCCAGCGATGGGCGGC
CAGTCCCAATATCCTTACCCGTATCAGCAAGGAATGGGCTATTGGTATGCTCAGGGCTAC
ATGGCTCCCGGGTACTACCAGCAGTACGCGGCCGCGTACAGCAACCCTCAGGCCGCCGCG
GCAGCGGGGTACCGCATGGGAATGGGCGGTAATGGCGGCGGCGGCGCCGGGTGGGGCGGC
CCCTCGCAACCCCTCATGTACGCGTCGGCCGCCATGCCCTCCGCGCAGTACCCCTCCCAG
TAGCAAGGCCGCACTCCCCCGCCCCCCGCACCAC
(1414 bp)

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