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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp60118_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_hnRNPA/B-like_28_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007298 P border follicle cell migration
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007319 P negative regulation of oskar mRNA translation
GO:0007411 P axon guidance
GO:0030529 C ribonucleoprotein complex
GO:0043186 C P granule
GO:0043234 C protein-containing complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0045727 P positive regulation of translation
GO:0046331 P lateral inhibition
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048027 F mRNA 5'-UTR binding
Transcript
Level		FPKM:27.06 TPM:21.38
ORF EntryO_BomoMG27523_3prime_partial:A_BomoMG_comp60118_c0_seq1
Sequence
(Nucleotide)
GCTACTTCCTCTTTCCATTACTTTTTTGAGAAAGCGGAAGTGGTTGGTCCGCCATCATAA
TCACTCGTGTGGGTCTGTGCTTGTGTGGTTTGGGTGTCTTTACCGGTGCCAACCTTTATT
TTTAATTAGTAGTAAGGTATGCGTATGAATCCAGACATGGACGATGATGAGAAGGGAAAA
CTATTTGTTGGAGGACTATCATGGGAAACATCCCAAGAGAACTTGCAACGCTATTTCTCA
CGTTATGGCGAAGTGATCGACTGTGTCGTCATGAAGAATAGCGAGTCAGGACGTTCGAGG
GGCTTTGGTTTCGTGACATTTGCTGATCCTTCACTGGTCAACCTCGTGCTACAGAATGGA
CCTCATCAACTTGATGGCAGGACCATCGACCCTAAGCCGTGCAATCCTCGCACTCTTCAA
AAACCGAAACGTGGCGGTGGATACCCTAAGGTGTTCCTTGGCGGGCTGCCATCGAACGTT
ACCGAAACCGATCTCAGGGTATTTTTCGGACGCTATGGGAAGGTCATGGAGGTGGTCATT
ATGTATGATCAAGAGAAGAAAAAGTCTAGGGGTTTTGGATTCTTGTCTTTCGAGGATGAA
ATTTCTGTTGAGAGAGTGACCCAAGAACACTTCATTAACCTCAACGGGAAGCAGGTTGAG
ATAAAGCGCGCTGAGCCTCGAGACGGGTCTGGCAAGCTCGGGTCGGGAGGCGGCGGCATG
GGCGGCGGCGCCATGAACGCGCCCGGGGACGCGCCCGCCGCCGGCCAGTGGGGGCCGCCC
GCCGCGCCCATGAACATGATACAGGGACACAACGGACAGATGGGAGGCCCGCCCATCAAC
ATGCCCATGGCAGGCCCTAACATCATGCAAGGGTACCAGGGCTGGGGCACGTCGCCGGGG
CAGACGTCGTACGCGGGGTACGGCGCGGCGGGCGCGGGCGCGGGGCCCGGCA
(952 bp)

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