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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp56920_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_synoviolin-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0000836 C Hrd1p ubiquitin ligase complex
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0061630 F ubiquitin protein ligase activity
GO:1904264 F ubiquitin protein ligase activity
GO:1990381 F ubiquitin-specific protease binding
Transcript
Level		FPKM:39.11 TPM:30.90
ORF EntryO_BomoMG27435_3prime_partial:A_BomoMG_comp56920_c0_seq1
Sequence
(Nucleotide)
GCGTCGGGGGCGCGGGGCGCGGCGCCGGGCTCGGCTGCGGGCGCGCGCAGCACGTTGAGA
CGACACGTCGGGCACGTCTGCTGGCGCTGGAACCACAGGCGGAGGCACGCTGCGTGGAAA
ATGTGGTTGCACGGCAGCTTCTTCGCACCAGAATGCATTTCCTCTCGACAAATAATACAT
TCATTATCAGCAGCTTCGAGTTCTGCTTGTGTCGCATCCGGATACAGTGTGTTCATATTG
CGTATTGCACGTCGGGAGAGGACCACATCATTGTATGCTTTCTTGAAACTCCTCATAGTT
TCATACATGGGCCGGAATGCAAATAACGGAAGAGTATAAATGCGGACCATGACAGCTACA
AATCCAATATAGAGAAGTACTTTCAAGAAATTTATAGCAAGTTCTGTGTACAATAGAACT
GCTGCTTTGCTCTCCCACGGTGCTTCCCAACGAGAGTCGATGGCATGTAGAACATACTTA
ATCAATATATTGGCAATCATGATTATAAGTATGCTGTACTCAAAACCAAATACCAGCTGC
ACCGATGGGCCTTTTGATGTAGTGACATGATACGCATGGTGAATGAAGTAGAAGTCTGCG
TGTGCCAACAACATTAGCAAACTTAGAATCCTTATATGAAACACCCATCCAATAACAGGA
CTTCTCTCCATATAATCAACTCTATCTTCAGCAAGCCAGTGGAATGCTTTCAGGAATAAC
AACAGTGTAAAGAGAGCAATGAACTTTGGATTGAAATCATCTCTGAAGACAGTAAATGCT
AAGCACGTCTCTGTTATGGCATACCATGACCTTTCTATTAAATGCTCAAACTCAGCAGGT
CGAAGTTGACCAAAGAATATTTTCCTTAGCATTTTTCCCACCAATAAAACTAAAATAAAC
GCTTGCAAATACATTACTGCCATGCTTGGATTTGAATTTGTTAAATAAACTATCGAAGGG
TAAAACTGTTTCTTTTGGTAATATGCATTGCCGATAACCACAGTGGTTAGCGCGAGACTG
ATCACCGTCGCTAACACTGCCTTCATTTTGATAGTTTTTAGGAGCTCCTTCGAAATGATA
TCTTCATGTGCCTCGTTAATTAAATTTCTATGCACTCCGAAATATATTAATAGTTCTTAA
AAACATTTTCAAAACATCATATCGTATGTTCGCCTATGGTTC
(1182 bp)

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