SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp53907_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		26S_proteasome_regulatory_ATPase_subunit_10B_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016787 F hydrolase activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
GO:0090261 P positive regulation of inclusion body assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
Transcript
Level		FPKM:31.94 TPM:25.24
ORF EntryO_BomoMG27365_complete:A_BomoMG_comp53907_c0_seq1
Sequence
(Nucleotide)
ATTTTTTTTATTACACACTTTTACACATTAATCGCGCACAGATATACTGTGAAAGATTTT
TATTTCTAATGTATAGTTTAAAAAAAAAAAGATTAACACTAATGATCAGCATTTTCGTGC
TTCGAATTTCAAATGTTCATTGAAACTGCATTCTTAAAATAATTATCAGTAAAACATTTA
AGGTGTGATTTACAAGTTTGAGAACCAATGACTAAATAACATTTTTCAACACACGTGAGA
AAACTTAAAGCGTGTAAATAAAAAAATACAATTTACGCAGCAGCCTATTAAAAATAAATT
TCAAGAAAATTTTAAGGACCCAACATTCGTTAATGTCTCTATTTCTTTCGAGATACAAAT
CTATAGTGATGTTTATTTGCGACACATTGCGTACACGATAAACTTTAAAATATTTTTTTT
TGTATCGTTTTTAATTAACACACTTCTAACAGTGCACTGATTTTCATCAATGGGTACAAT
TCGAGATACCATTGTTGTTGAAATTTAAAGTGTATTAATTTAGTGTTCTAATTATTTTGG
TTCACATAACATTTATTTAAGCGAAGTTTGAATCGAATGAATTACCTATTTAGTCAGTGG
TTCTAAACCTTTTTTCTTGGCGCCCCTTAAATGAGTCACATGATAATTATAATTTAAAAT
CAGACGGGCTTGTAGTCCAGTTTGCTCTCCAGCTTTTTGTTGTCGGCTACTTTACGGACG
GCCTTCATTAGATCCTCCTGTATGATGTACTCCCGCTCGGCCCTGATGGCGAAGAGTCCT
GCCTCCGTGCAGACGTTGCGCAGGTCCGCGCCGTTGAAAGTATCTGAAAGCTTCACGACC
GCCTCGTAGTCCATCTCGCCGTGCTTGGCGATCGGCGACGCGTGGATCTTCAAGATTTCC
AATCTAGCCTGTTCATTGGGCAGGGGTATTTCGATTTTCCTGTCCAATCTTCCGGGCCTC
AGCAGAGCGGGGTCCAGCGTGTCTGGTCTGTTGGTGGCCATGATGATCTTCACCTGTCCC
AAGGAGTCGAAACCATCCATTTGGTTCAACAACTCCATCAGGGTACGTTGGATCTCTCGA
TCGGCGCTCGTGCCTTCGGAAAAACGTCTCCCACCGATGGCATCGATCTCGTCCATGAAT
ATGATGCAGGGTTGGTGGTCCCGCGCGTAGTTGAACATCTCCCGGATGAGGCGGGCCGAT
TCACCGATGTACTTGTCAACAATCGCCGATGACACCACCTTTAAAAAGTTAGCATCGAGC
TGTGAAGCCACAGCCCTCGCGAGCAAAGTCTTTCCTGTACCAGGAGGTCCGTACAGCAAA
CATCCTTTGGGTGGAGTGATACCGACTCGAACAAACAGCTCTGGGTTCATTAGGGGAAGT
TCAATCACCTCTCTCAGCTGTCTAATCTGTTCTTGAAGACCTCCTATGGCGGAATAGGTC
ACGTCACCAGGATCCTCATGACTCATGTTGTAAACTAGGGGATCAACCTCTCTAGGCAGA
TGTCTCATTATTGTAAGAGTAGTCATGTCGAGGGCAACTCGTGTTCCTCCTTTAAGCTTG
TTCTTGTCAAGTTGCCGACGACAGCCAACAACGTAGCGAGGGCCATTAGTAGCTTTTACA
ATAAATTTTTCTTCTGTGAGCTGTTTCAAGACTTCTCCAACTATTTGTCCAACACTTTGT
AAGGCTTTCAGGTCATTTTCACTCTTGTCATATTGTTTGGTCAAATCTTTTAGTTGGTCA
CGACCTTCTTTGAGTCGTGACTCGACTTCCTTATGCTCCATGAGCTTCTTTCTGTAATCC
TGGAAGGCCTTTTCTCTTAACGGCTCCATGTCCGATGTACTAGCCGGCATCGTGAACAAT
TTAAATTATTATTAATTTTAACTTTATTGTTCAATGAAATTTATCACAATTCACGAAGCT
TGACGTTTCATTGGCG
(1936 bp)

- SilkBase 1999-2023 -