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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp52764_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_tropomodulin-1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0008180 C COP9 signalosome
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0030016 C myofibril
GO:0030017 C sarcomere
GO:0030049 P muscle filament sliding
GO:0030239 P myofibril assembly
GO:0030863 C cortical cytoskeleton
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0070307 P lens fiber cell development
Transcript
Level		FPKM:42.95 TPM:33.93
ORF EntryO_BomoMG27307_5prime_partial:A_BomoMG_comp52764_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTAATTGTTTATGTACTTTATTTAAGTTTTTTTTTACAGTTGTCACAAACTAC
AGGACATCCGAACCTAAAGTCGAAGTTATCGATGGATCAAAATGCTCCTGAACCCATAAT
CTCATAAATAAATCTATAGTTAAAAATAAAAATACATTATGTTTTTTAATAGTCACAAAG
AATTTTACATTTAAAAAAAATACTAAATTCATTTACAATCTTCTCCTCTTATGGACAGTA
AGAACGAAATTCAAAATCCTGTATTTACTGTTTTAAAAATGGAAATTAATATAAGACTCA
TGATGCATTTATCACAATGTTATGGACACATCTTTCTTCAGACACAAATCAAATATACAT
AAAGATTAAATTAAAAAAAATATGAAAGCTTTTTTTTTATTTCAAGAAAGCAAAAGTTGA
AATATTTATAGTAAAGCTAATCCGCAGATGACTCCGCATCCGTCTCGCTCACTCGCATCG
TAAAACACAAGAGTGAGCGAGACGAAACATAGAGCTCGCGCACTAAGACATAAGACGTAT
ATTTTTAGCATTATTCGTTCACTACACATATAAAAAAGGTTTTTACGAAACAGCGAATCG
TAAGGTCTAGTGCTTTATTAAAAATTTAGTTAAAAATTAACTCCATTGATGCAAAAGATC
ACCTCTCATAGTCAAATTCGATTAGTAAATAAATAGAAATTCCATTAACATTTCTTAAGG
TGGCAAGACGTTCAGTCGAAACATTAGTCAAAATTAATAATATTCGATCTAAATATTTTA
AGAGAAATGTGTTTTGCATTAATGGAATGTGAAACTACTTTAATATTATATTACAATTTT
AATATCTTTTTTTTTAATTCATTAGCACTCTAGTATAAGTATTACAATAACATTAATATT
TTCAAAAACGTACATCGTTCATATCATTTCGCAAGAATTGTAGTTTCGTTCCGGAAATGG
GGCGTTCATCATTAAGTAATTAACTTTTTTTTCCGCCATTACATCTGTCAATGATGACAT
TGACACAGAAAATTTATTATTTTCTATGGAAAACGGTTTCTCAAATAAATTAATTTAATT
AAAAAACTAGAATTTCTGAATTTTCTCAATTCATTCATATTAGAACATACAGTAAATTGT
CGTAAAAGAAAAAAATTAATAGAAACAAATTATTCAAAATGATTTAATTAAATTTGATTA
CAGCCATTGGCATTTTCATAAAATACTATATAGTTTTATTCTTAAAATAAATCACGGCAC
GTTTTATTGAAAGAAAATGATGACATTCTCTAATCCGTATAATTGTTTGATTAGTGAAAT
TAATCCAATTGTAACTAGGGACGGTCCTGCCTCTCTAGTAATCTTTGTCAACATTTTCTC
TAAAATTTCCACCACAGAACCACAATTCTTGTCAGCGACTAACATTCAGAACACAGACAT
AAAAATATAATCTGCTTTTCGACTTCTGTCATTGTGTCTTGGTAGAGTCGATACAATTTT
ATAATTGTACAGATATTTTCAAGCACATAACTAAAACTACATCTAATTTGACTATACCTA
AGCAGCTACACATACGAAGCGATTAAGGCAACGATTATGCTTATAATTAACTTTTTTTTT
AAACAATAAATATAAAGTGCATTTTAAAATCAATGCATTCGATTGGTTGATACAAAATTA
AACATTTAAATATCTAACGCCATCTTTGTATAATTATTATGCGGAGACGAATAATGATGT
TTGTTGTAACGAAATATGTATCGACTCGTTCCAATGTATGGAACACAATCACACAAGCCG
AAACGGCAGAGCGATGGGCCAACAGCGAACCGAGCCGAATGCGGATAAGGACTACGATCT
GAACGCGGACCGAGGTCCCAACGGGGATGAGAAATTTCACACATTAAATTAGCATCTGAA
CGCTTGCTACGAACCGGACTACTCGAGTTGGGATGCAAAGACTCACGAGAATAGACTACT
GAAGGCATGGCATCACGTGGTGATATAGGGTTGGTAACGGTGCGCGGTTCGGTGCGTGCT
TGCTTGCGGGACGGGCGCTCGCTCACGGGATCCAGCCCACGACGTAGCTGCGGCTGCGGG
TGAACTGAGTTATGCGACGCACGCGACAGCCTAATTGTAGTTTAAGTGTCTAAGCGCTAT
TCTGGCTCCGGCGCTGCTGGCGTATCCTATCGATGTTTCGTTGGAGATGCGACGCGACCC
TGTGCCTCGCGTCGCTGTACTCGAGGTGCAGCCCGAGACGCAGCAGGGTCGGATTCTGTT
CGACGAGCTGAGTTATCTCCATCTCGATCTTGTTACCGAGAACTTGCGATCTCTGGTTGG
AGGCCCGGAACTCCTCGACGGTGTTGGTGTGCAGCAGCGCGCGCACGAGCTGCACGAGCG
CGGGCGGCGAGATGAAGTTGGTCTCGACGCTGAGCACGCGCAGCGCCGTGTTGTGCCGCA
GCGCGTCCGCCAGCGCGCCCGCCGTGCGGTCCGTCAGCCCCACGTTCACCAGCGACAGCA
CCTCCACGTGACTGTTGCTCTTTAGCGCTTCGAACAGCTTCTCGAACTTCTCGTCGCTTA
TGTTCTTAATATTATTCCAATTGAGATCAGTCAGCTTCTGGTCATTTTGTTGCACTCGAG
CGATCGTTTCATCCGGGTCCGTGTCGTTGGGCGGGTCCATTGGGAATACCTTGGGTTTAG
TGGCTTTGGTGATGCCGTCCCATCCGAGTCCGACGGGCTGGCCCTTGTTCAGAAGCGACG
CGTGATACTGGTCCTGATTCATCATCGAGTGGAATCCGAGGATGGCCGCAAGATCAATGA
TCTCCTCCTGTGATGCAGTGCCGAGAGCCTGTTCGTATTCATCTCCGAGATCGATCGTGA
TCTGTTCCTCGGCGTCGCGCACCTTCTCCGGAGGCGGGGGCGGAATCCACTTCTTGCCCC
TGACGACGCCGGGGACGAAAGGCTTGACCTCGGGCCGGTCGGGGGTCTCCAGTGCTTGCT
TGTTGATGTGCTCTATCAGTTTCTTGCGATTCAACGGACCGGTGGGATCCTTCTCGCAAG
CGTAGTTGTTACGCTGTGACGGTGGAAGGAAATTGTCGTCAGGATCAACCTCCTTTGCCA
GCATGGTCAGTTCTTCTTGAGTGAGCTTGGACAGGAGCTCGTCCACGTCCACTTCGTCGT
ATGTAGACAACTCCCGCCCGTACAATTTGGCCGGGGTCGTCATAGTTGTAGTCTTTGTTG
AGGATGATTTATTTAAAACAAATAAAATGCTGTAGACTGTAAAACCCACGACAAACACTG
ACTTCGCAAGCGCCCTCTTGAAATGACAAATAAG
(3334 bp)

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