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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp47879_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		2-hydroxyphytanoyl-CoA_lyase_[Bombyx_mori]
Ontology
GO:0000287 F magnesium ion binding
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016829 F lyase activity
GO:0016830 F carbon-carbon lyase activity
GO:0030976 F thiamine pyrophosphate binding
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0048037 F obsolete cofactor binding
GO:0051259 P protein complex oligomerization
Transcript
Level		FPKM:49.03 TPM:38.74
ORF EntryO_BomoMG27087_complete:A_BomoMG_comp47879_c0_seq1
Sequence
(Nucleotide)
GCAAGTAAGTTAAAGTTATTTTATTTTGTTTATTTTGTAATAGTCACCTTAGAGCATCGC
GGTCTGTTTTTCGACCTTTGATCGCTTCTCCCCACTTCAGATATTTTACCATTGTGACTA
ATAAACGTCTCAGTGTTTACTTGAGATCAACGACGATACTTTTTAAGTGATAATGTTACT
TGGCAGATTAAGCCAATTGGTATTTCGAAGATCATTTTGCGTATCTCAAAAATTAAACGG
CAGCATGGGTATCGACGGAAATACAATCTTAGCTGAAAGTTTGAAGAAACAGGGTGTTGA
ATATGTATTTGGGATAGTTGGGATACCAGTCATTGAAACAGCAATGGCTTTCCAATCAGC
TGGTCTAAAGTATATTGGTATGCGCAATGAACAAGCTGCCTGCTATGCTGCGCAAGCTAC
AGGCTATCTAACAGGTAAGCCAGGTGTTTGTTTAGTGGTATCAGGGCCGGGACTACTTCA
CTGCATCGGGGGAATGGCCAATGCTCAAGTAAACTGTTGGCCATTGGTTGTTATAGCTGG
CTCGTGTCCTGAAGATCATGAAGCTATTGGTGGCTTCCAGGAATGGCCTCAGGTGGATTC
TAGTCGCATGTACTGCAAGTATGCAGCCCGGCCGCCCTCCCCCCGTCTGATCCCCCAACA
CGTGGAGAAAGCTGTGCGACTTGCATTAGCCGGCCGTCCCGGAGTATCATATTTGGACAT
GCCCGGTACTCTGTTAATGGCAGAAGTGGACGAAGGCAAAGTACCACTAGACTACTACAG
CGCAGACACGGTTAAACTGGCTCATCCCGATCCAGCGTTAGTAGATCAAGCGGCAGAATT
ACTTTCCAAAGCAGAAAGACCCCTGATCATAGTGGGCAAAGGCGCCGCATACGGCAAGGC
CGAAGAGGCGATACGAAAACTAGTGGAAAACACAAAATTACCTTTCTTGCCCACACCAAT
GGGTAAAGGAGTGGTAGCTGACGAATCTGAGTACTGTGTATCAACTGCGCGTACACAAGC
TCTACTGAAAGCTGATGTCATACTACTTCTTGGGGCTAGAATGAATTGGATGCTGCACTT
TGGACAACCGCCGAGATATGCGCCCGACGTTAAAATTATTCAGGTCGAAATATCTCCTGA
AGAATTTCACAACAGCAAGAAATCAGAATTAGCAGTACACTCAGACATTAGACCTTTTAC
AGAAGCTCTTGTAAAAAGGTTGTCCGAAAGGAAGTTCTCATTGCAACCTCAAAACAACAG
TTGGTGGCAGGGACTGAAACAGAAACAAAAAGCAAACACCGAATTTGTAGAGGCTCAAGC
AAGCAGCACTGCAGTACCACTGAACTACTACACTGTTTTCAAAACAGTTCAACAAGGCAT
TCCAAAAGATTCAATCATTGTCAGCGAAGGAGCGAATACCATGGATATTGGCCGAGGTTT
ATTGCTCAACAATCATCCGAGACACAGGCTAGATGCTGGTACATTTGGCACTATGGGGGT
AGGACCTGGCTTCGCTATTGCAGCAGCAATGTGGTGCCGAGACTATGCACCTGGTAAACG
TGTCATTTGTGTTGAAGGAGACTCTGCTTTTGGCTTCTCAGGCATGGAAATAGAGACAAT
GTTCCGGTACAAGTTACCTGTAATTATAATCATAGTAAACAATAATGGAATTTACAATGG
GTTTGATAAAGAAGTAATGGCAGATATTCAATCTGGCGGCGATGTTACTCAGTGTACACC
ACCCACGGCTCTCAGTGGTGAAGTACGATACGAAAAGATGATGGAACTATTCGGCGAGAC
TGGTCATCTTTGTCGGACAGTCGAGGACATTAAAGAAGCAATTAAAACGGCCACAGCTGT
TACTGATAAACCGAGTATCATCAACATCTTGATTGACCCACAGGCTAATAGGAAACCCCA
AACGTTCAACTGGCTTACAGAATCCAAACTTTAAAAGAAAAAATTATATTTAGATTAAAT
GCTTTGGTACAGGGTTTTTTGTCGCATTTAATGTTGTTGAAACTGTACTTCCTAATTTAG
GTTGTATTGCATCAGTTTCTTTATTTTTGTTGTACAAGGCAGATTCTTTTTTTTTTATAT
TAAATATTTTTGTAGTTTTATTTGAGAAAGTAATTTTATGCTATTAGTGTATAAGAGGAC
AAATAATAACCAATTCATTTGATAATCTTTAATCAAATTACATTTAGTTATTGTGGTCAC
ATTGTATTGTTGTTGTATAATTATTATAATGAACTTAAAAATATATTAAATACATAATTT
GTATGTTTTATAAACTAAATCCCTGTATTTCACTTAACTCTTGGAGGCAAATGAATCCTA
TTGTGTCGGTTGTCGAAAGCAACTTAATATGAGTCTGTGTTCACATCTTGCTGAGACAGC
CAATCAAGAAGTTTTCTATCACAGTTTGTGCCAGTTTGCAATTATTAGTAGTTGTCAAAG
TGTAAGCATCTTGATCATAATCATTGGTTAAAGTGAGATCTGCTCCTCTGATAAGGAGCT
CATTACAAGTATAAGGAAAATCAGCTGCAGCTGCATACATTAATGCAGTACTACCAGAAT
CATCTTGTATGTCAGCATCAGCCCCTTCATTTAACAGAAACTTCACAACCTCATGGTGCC
CTCCAGCTGCAGCCAGATGTAGAGCAGTCTCACCTTCTGGACCCCGCATGTTAACATTGG
CACCACACCATACGAGGTCCTGGCAGCTGTTTAGTTGGCCATAACTAGCTGCCCAGTGCA
GCGCCGTGAGACCATGCTCATCCGTGATGTCGACATACTGCTCCAGTTTCAAATCGTCAC
GAGTGATTTCTCCACGGCCTGCCTTCGCGTGCAGGCTGTAATCCGGCTGGGGTAGCTCCG
GAACTCGCGCCTGCGTATTACCTCGCTGCAGGTTAGTTAAAGCAGTGCATTGCACCGATT
TATAAGGTGTGAATGCACTCTTCCGGACACCATTTAAATTAGGCGCCCACCGCTGATATC
CTCCACTACCACTTTTGCTGCTGTCTTGACTTCCAGAATCAAATTCGTATTTAAAACTGT
CCACATTATCTTGTTTCTCTTGCTTAATGTCGATGTTCTTCCCTTCGTGTTTCAAAGAAA
CGGCCTCTTCCATTTTATTTTTATCCAATACCTAAGTATTTAGTATTTATTTAGTTTGTG
GACAAGTTAGTTGAAATCTAAAGTCG
(3206 bp)

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