SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp43250_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		hypothetical_protein_KGM_13767_[Danaus_plexippus]
Ontology
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:294.17 TPM:232.42
ORF EntryO_BomoMG26828_5prime_partial:A_BomoMG_comp43250_c0_seq1
Sequence
(Nucleotide)
TTTTTTTGTATTTTTTTTTTTTTACTTCTGAAAATTTTATTATTTGCTAATTGGGTAAGT
CAATTACAGTGTTGGGTAAGTTAAATACAATGTCAAAATTTTAAAACTAATTGTCATTGA
TTAAATGTCAAAATTCTTTTTTAAGAATTCTTCCTTCTTTTCTTAAGATACAGAATACAG
TTGCCGAAGCTCTTCACATCTTTGCCTTTCCCATAAAACAGTTACAACAATTTTGCAAAG
GTTGTCCAGCTTGCAGTTAATATTACAATTTGGCCAACGTGTGTCGCTTAATTTTGAATA
AAAAGCTGCGTATTTTTCCAAATATTCTTTGTTTGTAGTTACCATTTTGTAAACTAAATC
GTTCATTGACACTGCCGACAAATCTGTGAGACCGAACGTATTCTTCATATCGTATAGTTG
GAACCAATGCGGCCTTCGGTTTGGAGTTAAATTAGCTTCCGTTAGATTGTAAGCATAGTT
CACGATATTCAGAGGTTCGAATGTCCGAGTGTTTATAGTAGCAATCTTATAATTTAGATT
GTAGAACGTGTAGCTGGTGGCACTACCTCCTCCCCACGCAACGTTAATTGGTGTACCTTG
CTGATTGTAGAATACTTTGAACTCATCAGAATGAGTGTGCCCATTGAATTCAGCGGCTAT
TGTGTTGGTGAATCTGTTAACTATTTTGTTATATTCTCTAGTCCAAGTGTATGTGAGGTC
GTGAACTCCAGGAGGTATGTGTGCCAGTATGTGAACTTTCTCTCCGGCTATTTCTGCTTT
GTATAATTCTTCAACTAACCAATCTAAATGTTTCTTTGCGTCCAAGGGGTCATAAACTAG
CCACCAGTTATATCTATAAGCGACATTATTGTTGAGTACGATAACCCTCAGACCGGGTCT
CACCAACTGAGAGAATTCTCCGCGTTCAAGTAATGTCCTTTTAGAGTCTTCAGTCAAATA
GAATCCCCATTTATCAACTAACCCTTCATAAAGCCAAGTAGTATTCAAATGATCTCCAAT
TACCCTTGAGGGAGCAAACTGATTGGTAGGTTGAGATTCGTGGTTTCCTAGTACAGGTAT
AACCTGTACGTCATCTCCAAAGGTTTTCCTAATTTTTTCGATTAAATATCGGTTCATGTC
ATTAATTAGTTCATAAGACGTTTCCCAAACACCGTGATCAATAGTGTCACCGATGTAGTA
CAAAACATCTATGTTCTTATGTGTCTCTGCTATTCTATCAATAACATCATCGAAAGCCCA
AATAGGGGAGTCACAGTTCCTGTAATCACCCCAATAACCAGCCGGTGCTGTGTGCCGATT
CCAAAATCTGGTTTGTGACTTCTTCCTCAACTCTCTGATCTTTGGTGCAACGTTCAAATT
CAATTTTATTTCTCCAGTAACATTAGTTAAGCTCTCTGCGACAACAGACTCGTCGATGTG
CGATTTGTAAATGTAATTACTTGCAGGTCTTTGTCCTATTCTACAGCATACCGGTTCATC
GCAATCAGCCACTCCGAAAGCTTCATAAAGAGGATCGAGATGAGCGTCGGTGATTATCGC
AATCGTCAATGGTTTAGTTTCGAAAACTGGCACGGCTTCCACAGCAGGAGGCGCGGGGAG
GGTTACCTCCCACTCAAATCGTTGATCGTCAAAGGGACAGTTATTCGGGTTTCCAACGTT
TTGTAGCACTAAACCACAAAATGCTTCTGCTGTAGCTTGTGGTTCATTTTTGACAATGTA
ACGAATTATTGGTATGTTAAGTGAAACAGCTCCTTTGCAAACGCCATAACCAGCAATTCC
TAATGTTATACAAAGTGTAGATATAACATTCGACAATTCTTCTTCAGTTTGCCCAGCTTT
GAGTCCCTGTATAGCAGTTCTGAAAGCACTCCGACAGATGACGCAGTCTAGGGTCGTTCT
AGTTGGACTGGCGTATTGAATAGAATTTTCAGAAACGTATTCAGGTCTATGCAAGATTTC
AATAATATCTTCTAGTAGGCTTTTGTCTTCTTCACTCAGATCATTAACCAGTATTTTCTT
TAGAACATCTTCTACTGTTTCTAATGAAATAAGCCGGTTTGCAAAACTAGAGCTCACCAA
TACTAAAACTACCACAAGGAATTTCATTTTGGCCGGTCTTTCACCCGCCAATGAACGATA
ACGACGGCGCTCCAACCTTATATAGTCTTGACACGCTGTACTAAGTATTTTATCCAAGTT
AATGAAATGTTTACCGGTACTCGTATTAGACCTTGTTACAGCCGTGATGCGGGTAAGTAG
TCTATTAG
(2288 bp)

- SilkBase 1999-2023 -