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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41978_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_protein_ref(2)P_isoform_X3_[Bombyx_mori]
Ontology
GO:0000407 C phagophore assembly site
GO:0000932 C P-body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0042169 F SH2 domain binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0044753 C amphisome
GO:0044754 C autolysosome
GO:0046872 F metal ion binding
GO:0051291 P protein heterooligomerization
GO:0061635 P regulation of protein complex stability
GO:0070062 C extracellular exosome
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0097225 C sperm midpiece
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:160.11 TPM:126.50
ORF EntryO_BomoMG26654_complete:A_BomoMG_comp41978_c0_seq1
Sequence
(Nucleotide)
AGATTTATATATTAGTATAGATTACTCTAAGACACTAGGAAGAGTGTACTATGTAGTTTT
CGTAACTACTGTGCTCTTGTTTCAGACGTAAGTCACCTAAGATGTCATACTTCTGCGCGT
TGAGCCTAAAACTTCTAAGATCATAAGATCATAATCACAAGTCTTATATATGTATCTTCC
CAGTAATGGGCGAAAGCGCATAGCTTACCCTCCACCGTGACATATCGTGTTACAAGTGTA
CTCCTCATAGAAATGATATCTATTCGTCACACTATCTTGCATGTTGATATTTTATCTTAT
CACATAATGTCATACAGATATATAACAACTTAAGAAGTAGGGTATTTCATCGCAGAGTTG
GTGTAACAATCGTTGCTGTCAACAATCAGTGGCACATTTAAAAGATGAATACAATTTTGG
TCTTCGCGTTAGTCGTGTTGGCTGCTACCAATGCGGCCATACTACCGTCTAGTACGAGAG
CCAACCTAATCGTTGGCTACGTTAGTACAGGAGACAGACTTTTGTACAGATCCTACGTAT
ACCAGCCAGCTAGGCCGAATACTATTCAATACCAAGACATAGTGTATCGCGGTAACGCAA
CGACGCGCATTACGGCTATACAGGCCACGGAAGTTGGGGCAACTCAGTACGCATCAGCCT
GGATCCTGTCTGGCGGGCTCAGTCAGAACAACGTCACGGTCCGATTCCAATCAGCTAGAG
GATACGGATATTATTACCTCTTCGACGTATGGGGACGCTAATTTTTTGATAACTCTTCTT
TCATAAAATTGTCTAAATATTGTACCTAGCATTCATATTTACAAGAAACGATTTTGTCAT
AAAGCGACCAATTTATAAATTTATTAATACATTTGCGTAAGGTTTTTAATAATAAAAATT
TATTGAGCAAAAAAAAAAAAAAAAAAAAAGTGTTTGATATGTGAAGAATTACGGCAAATG
GAATGGAATACACAGAGCTCAACAATCTTGTATGGTAATTAAAGCACATGCCGATTTTCT
AATCCCACTTTGTATATGACCTCAACATGTGGATATTAAAACACTAATATTGGTAATATT
TTCAGTTCATGATTATAGCTTTAAGTGTAATGTGTTTCCGCGCTCTTAATTTTTTTATCT
TAAAAAACAAAAGACAAACTCATCAATCAATTCGAAACTATTGAGAAAATTGTAGTCGCC
CAGATATCCATCCCCACAGAAGATAGAAAATAATTTCAACATTAATATTTTTTTCTTAAT
AGTATCATCATCAGGCTGTATTTTTCCACTGCTGGATGTAGGCGTCTCCTGTAGTACGCC
ACAATGAATGGTCCTCCTCATAATATGCAAAGTTTAAAATGTAAATATGTATTAATATGT
TACTAAACCACTAATAAGGTACTGCTAACCAACACCAGATATTATAAGAAAAATTGTTTC
AAAACAGATTACACATATTTGAAATCACTTACTCTAACCATCACAGAACATCATTCTTTT
CAAAGTACATACAGTACATAAAATCATTAACATTCTTTGAAAACTGCTAACATCGACATC
AATGTCGATTGATTTTAGCATGTTTCAATAAGATTTCCATTTTCCATCACAGATCATTCC
CATTTCATCTACAAATATATCTAAAAAATTTATCATTCATATCAATTAGAAAGGAACAGA
GAAACAGTTTAGAGCAACCACGTTTTACTTTTGTTTCCTTAGCTTGATATTACTCAGGTC
AGGTTCAAGTAAATTTTAACAAAAATATTTGCATGCTGCAAACTGTCATAGTGATGTCAT
AGAGATGTTGGTAATTCATTAACAACAGACCAGTCTACTCAAATAGTAAAACACGAAATT
CTAATTTTAAAGTACTGTTTGCAGACTTCTTTTGAGTAAATGTTTTTTTATTGGTATAAT
TAAAATTTATTCTGCATTTAGCAGATTTATCCAGATGGACAAGTTTTATATTTTTGTCCC
AAGAGGCAGACAAGTACGCCTGCCTGACGTAAAGTGGGCACTGTCGATCATGAAACATCG
GCAGTACCAATGTCGGTGCTTAATAAGTATCTTTTTTATTACGCATTACTATATGAATAT
TAATCACATCTCTACTATTAATGAAAAAACAATAATAGTTATTGTTAAACAAAAGTCAAA
TGCCACTGTTAAATTATTTTTTACTTGAAACAACTTAGATATGATAATGTGTTACATACA
TAGCTGAAACTGAAGTTAATAATTGTACTGATTCAAAAATGATTGTTTCATAGCTATTGT
TACTTAATGTCGATTATCAAGTATAGATATATAGTATGGAAATGATTCTTTAAATCTTGG
GATTAACCGGAGTGAGTAAGTCGAGTACAGCAGCGATGTTGCCGTCCTTCTTCTCCAGGA
GCTCGACCAGCCAGCCCCCCTGGTTAGTGAAGCCCATCGCCAGCATTTGACGCAGTGCCT
CATCGATATGTGGCTTAGCGTGGTGGAATCGTGGCGGAGTCACTTGTTGCTGCATTGGTG
TGGGTTGAGGTGTCGCCGACTTTGGAGGAGCAGTTGCTGGATTTGGGGGAGCAGTTGCTG
GCTTCTGAGTCGACTGCTGGTTGTCTTGTCTCTGGGCAGCGACTGGTTGGAACTCCTTGG
GACGCTCCACTTCTTTAGGTTTCAGCACAGCTGTAGCGGTATTAAGTTGCGGGTACAGAA
GTTGTCCAATAGTGACCCGCTGCTGGAACTCTTTGGGCAGATTAAATCCAATCGGAGCCA
CTGGTACATCCATGATGTGCTCGTTAGCACTCGAATCCATCAAATCTTTGTTCACCATAG
TCCAATCGTCAACCTTGTCGGAGGAAGCCTCTTTGTCTTGCCCAGAAGAATCAGAACTGT
CCGAGTTTACAGATTTCGCATCAGTTTTATCCACATCGATCGCAATATTAGCGTCTCCCT
CTCCTCCCTGAGCTTGGCTAGTAGCGGGCTTGTCGGAATCCTCGCCTGATGCTTGAGGCT
GATCATTAGCAGAGGTAGACGGGTTTTGTAACTTGGCATTGTTGTGGGGTTCGATATACT
TAGTGCGTATTATGTTAAGTACCTTTTGCAGATCATCCAGCACTTTAGGATCAGGTTCTT
GATTAACATCGAATTGAATTTTGGGTCCTGAAGTTCCCCCATTATCGAATAGCGGAGCAG
TGGCAGTTGTGTTTGGAGGGCATTTCTGTGAGGCATTCTGGGATTGAGGGGTCTGCTGGG
AAGGATTTCGGTTCAGTGAGGCTGCCTCAGAAGCCTTTGGTGTCTCGGAAGCTTGATCAG
TATTTTGAGGATGAGGAACTTCCTGAGAAGTACTTTGGTACTCGGAAGTTGGCTTGGGAG
TCTTCGGAGGAGGGTGCTCGGTGGAAATATCCATATCGAGACCAATATCTCCAACGAGGT
TGGTAAACTCGTTCATGTATGTGGTGAAGGTGTCCAGCCAGCTCGGCCGAGAGCGACGCT
GGTGTTCACGCTCTGACCTTTCCGCTTTAACCCCATTAGTTTCTTCACGGCGTTTTGCGT
CCCCGCTACGTTCACGTCTATTCTTTTTGTAAGGGCATTGGTCGACGTGGGTAGCAACCG
ATTTGAAAATATGACGGGATCTCTTAATTGCCGCCTTGATCAAGGTGCGCGACATGTCCG
GTGTGGGGAGACGGACCATGCAGTGTTCATTGTGATTCCCGGCGGCCTCGCACTTGGAGC
ACAAGTCGTAGTCATGACAAATTGCGCACTTGTAACGGAAACCCACAACTGGAGAGTTGC
ATACATTGCAAACGACTCCGCTATGAACTGCCGTGTTACCATCCGTGTTTTCTGGGAACA
TTGTAGTCGCAGTTATCTCTATTTCACAGTCATCATCTCTAATATCTGGATTCTTGCAGT
GAACGTTGAGCTTAATCAGCCCACTCTCCAAAGACACTAGTGCAGTCATCATTTCATCAT
CTGATGAAATTATAATGTCATCACCTTCCTCATCTTTCCATGATACTTTATAAATCTTGT
TCCGCAGCTTTGGGTAGACTTCTTGCAGTTTCGCATTCAAATAATGAAAACTGCTCACAA
CAGTTTTCTCAACACCAAATCTCCTTACTTCTGGCTGAGCATTCTCCTCAAAAAATGCAT
AAACTTTAAATGGAACTTGGTCCTCCATTTTTGATTTATATAAATGCACTGGCCGTAAAA
TGACACAAATAACACGTATTAATACCGGCGTTACAACTAATTAATGGTGTTCTTGAGGCT
TTGAATTACTTTTTATATACTTTTATGCAAGCACTATGAATTATGATTCACGTATTTTCG
AATGTTAGAGAACGATACAGAAAAACAATATTTT
(4354 bp)

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