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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp41158_c1_seq51
Scaffold_idBomo_Scaf027
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_matrin-type_protein_5_[Plutella_xylostella]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.41 TPM:0.33
ORF EntryO_BomoMG26446_5prime_partial:A_BomoMG_comp41158_c1_seq51
Sequence
(Nucleotide)
GCTTACTACAAATATAAAATGGGTAAAAAGTATTACTGTGATTACTGCGATAAGTCTATG
GTTGCTACGCCGGCAATAATAAAAACACACAATAAAGGATTGGAACATCAGAAATTGGTA
CATGAACACTATCAAGAATATAAAGATCCAGAGACTATTATATTAGAAGAGAGTAAAAAA
ATTCAATGCACCAGATTTATGAGTGGAAATTGTTCGTTCGGACCAATATGCAGGTACTCG
CATTACACGAAGGAGGAATTAGATAATTTGAACCTACAAGTTCAGCAACAAAAACGAAAG
AAAACAAAACAGCCAGAACCGTCCTTGGAAAATTTGTATGAACAATTGCAAAATGAAAAG
TCAAACGATCTCACTGTGCAGAGCGAAACTCTCATAGTTGATGCGAACGGGCGGACACAT
TTCCTGCCTTGGGTGTACAATCCTAAGTTTGATATGTTCAAATTACCACCGAGCCTAGAA
AGGTTCACACCGGAAAATATGTATTGTCCTCCTACTCATTGGGGATGAATTGGAATATGT
ATGTATTTTTGATGAAAGCATCACTTGTTGCATTTGTGTAGCTGATAACACAATACTTCC
CTTTTAAACCAAAATAGATTACTATTTTGCATTAAAAATAAACAGGGCAGCGGAATGTGC
ATATAACGCTCCCTAGCAGCAGTAAATATGAAAATCAATAAATTTTGTACACTGTTAGGT
AGGAAACTGGTATAAGTATGCAGAGTAAACCTCATGATTGCATAGTTCAAGATGACTAGA
TCTTCTGCTACAATATAAACACTTATTGACGGCTTGGTCTTATTTTGATTACTTGACCGC
CATTCATAACAACCATGTGTTATTTATTGTCCCTATTACATGATGTACTTTATTCTCTAT
GTCTAGTACTCACTACATTGTTTTGATTGTTATTTATTATTAATATGTAATTTTGCTTAA
CCTTAAAACTTTGGTAAACACAGTTATAGTAATCGGCAAACTTCTTGAGCAAATGACCTT
GACTGCGCAGAACCGAATTTTAGATCACTTTGGTGGTGAGGGTGAGGCGCGACGGCAGGG
GAAATCGTATCGAGCGCGTTATTGGTAGATCAGTCGAACCTTGCGTCCCGCACCGCGCCC
TCATTCCGCTTGCTCCCAAAAGTACGCTTGCGTACAGTGGAAAGTCTATCGTTATTAATC
GTTAAGTTATTTGTTATAATTGCTTGTTGACTTTGTTGCCATTGCTATTTGTTGAGTGTT
TGTTGATTTTTTATAAAAAATACACTATGCCGCGACAAACTGGTGTAGTATTCAAAAGAA
AGGGTAGAAAAATTGTGTACGACGTATATTGCTTCATTATAAAACAGGGGAAGAATGATA
TGGAAAAAGTAAAACAGACTTCGGAAGCAACAAAAACATCAGTGAGTACTGTTAGGTGCA
TTATTAACGAAGCTAAAGGCTCTGGCTTGCTCGCCGTGTTTCGGACTCCGGGTAAGAAAA
GATCAGGGAAGAAGAAAGTTACCGGAATGGATAGTTTCGTTCAATCTGTAATAAAAAGAT
GTAATCATAATAACTACATAACAAGCAGCGAAACTCCGTACCGTAGAAAGGCTTCGAAAA
ATTTAAAGAAGATATAAATTTTAATGGCTCGGAATGAAGCTTACGACGAATTATGAAAGA
GCTAGGCTTCAGATGGAAAAAAAGAACAGAAAATAATCGGAAGCTGGTAAATGAAAAAAG
TAACATTCGATTACTACGAATCGAATATCTTCAAAAAATAATTAATTATAGACAAAAAAG
AAGACCGAATCGACCGAGTTGTAAACTACGCCGATGAGCCCTATCACGATGATAGCGACT
CGGGTGATGAAAACAGTGATGATGATGATGGTCAAGATTATGATAACGAAAAAAAAATTA
CAAATACCAGCTTCGCTTCAACTGAACCAAGACCTGGCAACAGCTCTAGTTTTGACTTAA
TAGAAGGAATATCTATTTTACCCCAAGATTAAATTATTACAATTATTAACCTATATTTTT
TGTTGATGTTCTAATAAATATATAAATAAATACATATGTTGATTTTAATAATTTAATTGC
ATTATGACGCAGAGTAAATAATGTTTTTGCACGTGAGTGTACCATGCGCAAACTTACCCC
CACTACGTCAACAAATGCTCAAGAAGTTTGCCGGCTATTATACCTATCGCTCCGGTATTG
GGCACTATGATATCTGCGATTCAATTATTTTTATTTCACTCGCTTTAAAAGAGGCGAGGC
GAAGAGGTTTTACTACTGGTGGTAGGACCTCTTGTG
(2316 bp)

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